Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44833 | Canola | plastid | 97.3 | 97.3 |
| Bra031471.1-P | Field mustard | plastid | 96.62 | 96.62 |
| CDY46194 | Canola | plastid | 96.62 | 96.62 |
| CDY03773 | Canola | plastid | 95.27 | 95.27 |
| CDY54579 | Canola | plastid | 94.59 | 94.59 |
| CDY54581 | Canola | plastid | 93.92 | 93.92 |
| CDY33318 | Canola | plastid | 89.86 | 89.86 |
| AT1G60950.1 | Thale cress | plastid | 89.86 | 89.86 |
| CDY20591 | Canola | plastid | 85.81 | 85.81 |
| CDY20975 | Canola | plastid | 84.46 | 84.46 |
| CDX97925 | Canola | plastid | 79.05 | 79.05 |
| CDY19334 | Canola | plastid | 72.97 | 77.7 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 67.57 | 69.93 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 65.54 | 68.31 |
| Solyc10g075160.1.1 | Tomato | plastid | 64.86 | 66.67 |
| KRH26360 | Soybean | nucleus, plastid | 64.19 | 64.63 |
| Solyc10g044520.1.1 | Tomato | plastid | 62.16 | 63.89 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 60.81 | 62.5 |
| TraesCS7A01G325500.1 | Wheat | plastid | 59.46 | 61.97 |
| TraesCS7B01G226200.1 | Wheat | plastid | 59.46 | 61.97 |
| PGSC0003DMT400011522 | Potato | plastid | 56.76 | 61.76 |
| HORVU7Hr1G077750.1 | Barley | plastid | 58.78 | 61.7 |
| TraesCS7D01G322100.1 | Wheat | plastid | 58.78 | 61.7 |
| Zm00001d035002_P001 | Maize | plastid | 57.43 | 61.59 |
| Solyc01g103920.2.1 | Tomato | plastid | 57.43 | 60.71 |
| EES13199 | Sorghum | plastid | 58.11 | 60.14 |
| EES13198 | Sorghum | plastid | 58.11 | 59.72 |
| Zm00001d035003_P001 | Maize | plastid | 56.08 | 59.29 |
| HORVU7Hr1G077740.1 | Barley | plastid | 56.76 | 58.74 |
| TraesCS7A01G325400.1 | Wheat | plastid | 56.76 | 58.74 |
| TraesCS7B01G226100.1 | Wheat | plastid | 56.76 | 58.74 |
| TraesCS7D01G322000.1 | Wheat | plastid | 56.76 | 58.74 |
| KXG24178 | Sorghum | plastid | 58.78 | 57.62 |
| Os08t0104600-02 | Rice | extracellular | 53.38 | 56.83 |
| Zm00001d035001_P001 | Maize | plastid | 56.08 | 55.33 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 37.84 | 53.85 |
| Zm00001d049732_P001 | Maize | plastid | 52.7 | 50.32 |
| CDY04500 | Canola | plastid | 49.32 | 48.03 |
| CDX71446 | Canola | plastid | 49.32 | 48.03 |
| CDY30545 | Canola | plastid | 50.0 | 47.74 |
| CDY31182 | Canola | plastid | 49.32 | 47.4 |
| CDX77119 | Canola | plastid | 49.32 | 46.79 |
| CDX83271 | Canola | plastid | 47.97 | 46.1 |
| CDX69869 | Canola | plastid | 36.49 | 36.49 |
| CDY21622 | Canola | plastid | 36.49 | 36.24 |
| CDY29779 | Canola | plastid | 29.73 | 30.56 |
| CDY42796 | Canola | plastid | 29.73 | 29.14 |
| CDY71732 | Canola | cytosol | 20.27 | 24.39 |
| CDY66059 | Canola | plastid | 28.38 | 23.46 |
| CDX84071 | Canola | plastid | 28.38 | 23.46 |
| CDX93825 | Canola | plastid | 27.7 | 22.91 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | GO:A0A078FIS2 |
| UniProt:A0A078FIS2 | InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY12877 | ProteinID:CDY12877 | ProteinID:CDY12877.1 | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00070534001 | InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 |
| PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0001CAB7FE |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g13970DFerredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078FIS2]
Coordinates
chrLK032028:+:102295..103223
Molecular Weight (calculated)
15700.3 Da
IEP (calculated)
4.122
GRAVY (calculated)
0.006
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTAISSVI VGTSFLRRQT SPISLRSLPL ANTQTLFGLK SGTARGGRVT AMATYKVKFI TPEGEQEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGFVDQ SDQSFLDDDQ IAAGFVLTCA AYPTSDVTIE THREDDIV
101: GKVVSGFVDQ SDQSFLDDDQ IAAGFVLTCA AYPTSDVTIE THREDDIV
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Arabidopsis Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.