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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS4A01G319000.1
TraesCS5B01G560400.1
TraesCS5D01G569800.1
TraesCS6A01G306500.1
TraesCS6B01G334900.1
TraesCS6D01G285600.1
TraesCS7A01G562100.1
TraesCS7B01G091900.1
TraesCS7D01G001000.1
TraesCS7D01G187600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G10960.1 TraesCS6A01G306500.1 AT3G47620.1 21798944
AT1G10960.1 TraesCS6B01G334900.1 AT3G47620.1 21798944
AT1G10960.1 TraesCS6D01G285600.1 AT3G47620.1 21798944
AT1G10960.1 TraesCS7B01G091900.1 AT3G47620.1 21798944
AT1G10960.1 TraesCS7D01G187600.1 AT3G47620.1 21798944
AT1G10960.1 TraesCS1A01G325600.1 AT5G42980.1 15352244
AT1G10960.1 TraesCS1B01G338800.1 AT5G42980.1 15352244
AT1G10960.1 TraesCS1B01G339000.1 AT5G42980.1 15352244
AT1G10960.1 TraesCS1D01G327500.1 AT5G42980.1 15352244
AT1G10960.1 TraesCS7A01G562100.1 AT5G42980.1 15352244
AT1G10960.1 TraesCS7D01G001000.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS4A01G319000.1 AT4G22890.1 18243102
AT1G60950.1 TraesCS5B01G560400.1 AT4G22890.1 18243102
AT1G60950.1 TraesCS5D01G569800.1 AT4G22890.1 18243102
AT1G60950.1 TraesCS1A01G325600.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS1B01G338800.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS1B01G339000.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS1D01G327500.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS7A01G562100.1 AT5G42980.1 15352244
AT1G60950.1 TraesCS7D01G001000.1 AT5G42980.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G226200.1 Wheat plastid 98.59 98.59
TraesCS7D01G322100.1 Wheat plastid 96.48 97.16
HORVU7Hr1G077750.1 Barley plastid 95.77 96.45
GSMUA_Achr8P32490_001 Banana cytosol 40.14 82.61
EES13198 Sorghum plastid 78.17 77.08
TraesCS7A01G325400.1 Wheat plastid 76.76 76.22
EES13199 Sorghum plastid 76.06 75.52
Zm00001d035002_P001 Maize plastid 72.54 74.64
Os08t0104600-02 Rice extracellular 71.13 72.66
KXG24178 Sorghum plastid 76.06 71.52
KRH44081 Soybean cytosol 50.0 70.3
Zm00001d035001_P001 Maize plastid 73.94 70.0
Zm00001d035003_P001 Maize plastid 64.79 65.71
VIT_12s0035g00270.t01 Wine grape plastid 62.68 62.68
CDY12877 Canola plastid 61.97 59.46
CDY46194 Canola plastid 61.97 59.46
Bra031471.1-P Field mustard plastid 61.97 59.46
Bra027109.1-P Field mustard plastid 61.97 59.46
AT1G60950.1 Thale cress plastid 61.27 58.78
CDY44833 Canola plastid 61.27 58.78
CDY03773 Canola plastid 61.27 58.78
KRH26360 Soybean nucleus, plastid 60.56 58.5
KRH26361 Soybean nucleus 60.56 58.5
CDY54581 Canola plastid 60.56 58.11
AT1G10960.1 Thale cress plastid 60.56 58.11
CDY54579 Canola plastid 60.56 58.11
CDY20975 Canola plastid 60.56 58.11
Bra018415.1-P Field mustard plastid 60.56 58.11
CDY20591 Canola plastid 59.86 57.43
Solyc10g044520.1.1 Tomato plastid 57.75 56.94
PGSC0003DMT400011522 Potato plastid 54.23 56.62
Solyc01g103920.2.1 Tomato plastid 55.63 56.43
KRH43040 Soybean nucleus, plastid 56.34 55.56
Zm00001d049732_P001 Maize plastid 60.56 55.48
KRH26359 Soybean mitochondrion, plastid 66.2 54.02
CDY19334 Canola plastid 52.82 53.96
KRH59154 Soybean nucleus, plastid 55.63 53.74
CDY33318 Canola plastid 55.63 53.38
CDX97925 Canola plastid 55.63 53.38
PGSC0003DMT400087715 Potato cytosol, plastid 38.73 52.88
Solyc10g075160.1.1 Tomato plastid 52.82 52.08
PGSC0003DMT400031198 Potato cytosol, extracellular, plastid 52.82 52.08
Bra040469.1-P Field mustard plastid 56.34 45.98
TraesCS3A01G373900.1 Wheat mitochondrion 45.77 45.77
TraesCS1A01G276300.1 Wheat plastid 42.96 40.4
TraesCS4A01G355200.1 Wheat plastid 39.44 34.57
TraesCS4A01G356200.1 Wheat mitochondrion, plastid 50.0 33.81
TraesCS4A01G297900.1 Wheat plastid 29.58 28.77
TraesCS4A01G286700.1 Wheat plastid 31.69 24.46
Protein Annotations
MapMan:1.1.5.1InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BSGene3D:3.10.20.30InterPro:Beta-grasp_dom_sf
InterPro:Fd_plnGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0022900GO:GO:0051536GO:GO:0051537
InterPro:IPR001041InterPro:IPR012675PFAM:PF00111ScanProsite:PS00197PFscan:PS51085PANTHER:PTHR43112
SUPFAM:SSF54292TIGRFAMs:TIGR02008EnsemblPlantsGene:TraesCS7A01G325500EnsemblPlants:TraesCS7A01G325500.1TIGR:cd00207SEG:seg
Description
No Description!
Coordinates
chr7A:+:473807558..473807986
Molecular Weight (calculated)
15131.9 Da
IEP (calculated)
4.099
GRAVY (calculated)
0.003
Length
142 amino acids
Sequence
(BLAST)
001: MATVLSSLRL PFSICPAAPA APMAASRVAL PLSSTAARGM RLRAQATYKV KLITPEGEVD LEVPDDVYIL DHAEEEGIDL PYSCRAGSCS SCAGKVVSGQ
101: LDQSDQSFLD DDQIEAGWVL TCAAYPTSDL VIETHKEEEL TA
Best Arabidopsis Sequence Match ( AT1G60950.1 )
(BLAST)
001: MASTALSSAI VGTSFIRRSP APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGELEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV
Arabidopsis Description
FD2Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178W2W5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.