Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10960.1 | CDY24170 | AT3G47620.1 | 21798944 |
| AT1G10960.1 | CDY36943 | AT3G47620.1 | 21798944 |
| AT1G10960.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT1G10960.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20975 | Canola | plastid | 94.59 | 94.59 |
| AT1G10960.1 | Thale cress | plastid | 92.57 | 92.57 |
| CDY03773 | Canola | plastid | 88.51 | 88.51 |
| CDY44833 | Canola | plastid | 88.51 | 88.51 |
| CDY54579 | Canola | plastid | 87.84 | 87.84 |
| CDY46194 | Canola | plastid | 87.84 | 87.84 |
| CDY54581 | Canola | plastid | 87.16 | 87.16 |
| CDY12877 | Canola | plastid | 85.81 | 85.81 |
| CDY33318 | Canola | plastid | 83.11 | 83.11 |
| CDY19334 | Canola | plastid | 75.0 | 79.86 |
| CDX97925 | Canola | plastid | 79.73 | 79.73 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 68.24 | 71.13 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 67.57 | 69.93 |
| Solyc10g075160.1.1 | Tomato | plastid | 66.22 | 68.06 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 62.84 | 64.58 |
| PGSC0003DMT400011522 | Potato | plastid | 58.11 | 63.24 |
| Solyc10g044520.1.1 | Tomato | plastid | 61.49 | 63.19 |
| Solyc01g103920.2.1 | Tomato | plastid | 58.78 | 62.14 |
| KRH26360 | Soybean | nucleus, plastid | 61.49 | 61.9 |
| TraesCS7A01G325500.1 | Wheat | plastid | 57.43 | 59.86 |
| TraesCS7B01G226200.1 | Wheat | plastid | 57.43 | 59.86 |
| TraesCS7D01G322100.1 | Wheat | plastid | 56.76 | 59.57 |
| HORVU7Hr1G077750.1 | Barley | plastid | 56.76 | 59.57 |
| TraesCS7A01G325400.1 | Wheat | plastid | 56.76 | 58.74 |
| TraesCS7D01G322000.1 | Wheat | plastid | 56.76 | 58.74 |
| TraesCS7B01G226100.1 | Wheat | plastid | 56.76 | 58.74 |
| HORVU7Hr1G077740.1 | Barley | plastid | 56.76 | 58.74 |
| Zm00001d035002_P001 | Maize | plastid | 54.73 | 58.7 |
| EES13198 | Sorghum | plastid | 56.76 | 58.33 |
| Zm00001d035003_P001 | Maize | plastid | 53.38 | 56.43 |
| EES13199 | Sorghum | plastid | 53.38 | 55.24 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 38.51 | 54.81 |
| KXG24178 | Sorghum | plastid | 55.41 | 54.3 |
| Os08t0104600-02 | Rice | extracellular | 50.68 | 53.96 |
| Zm00001d035001_P001 | Maize | plastid | 54.05 | 53.33 |
| Zm00001d049732_P001 | Maize | plastid | 53.38 | 50.97 |
| CDY04500 | Canola | plastid | 51.35 | 50.0 |
| CDY31182 | Canola | plastid | 50.68 | 48.7 |
| CDX71446 | Canola | plastid | 50.0 | 48.68 |
| CDX83271 | Canola | plastid | 49.32 | 47.4 |
| CDY30545 | Canola | plastid | 49.32 | 47.1 |
| CDX77119 | Canola | plastid | 48.65 | 46.15 |
| CDX69869 | Canola | plastid | 35.14 | 35.14 |
| CDY21622 | Canola | plastid | 34.46 | 34.23 |
| CDY29779 | Canola | plastid | 31.08 | 31.94 |
| CDY42796 | Canola | plastid | 31.08 | 30.46 |
| CDY71732 | Canola | cytosol | 20.27 | 24.39 |
| CDY66059 | Canola | plastid | 28.38 | 23.46 |
| CDX84071 | Canola | plastid | 28.38 | 23.46 |
| CDX93825 | Canola | plastid | 27.7 | 22.91 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | GO:A0A078G586 |
| UniProt:A0A078G586 | InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY20591 | ProteinID:CDY20591 | ProteinID:CDY20591.1 | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00012758001 | InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 |
| PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0001CAB551 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g14670DFerredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078G586]
Coordinates
chrLK032110:-:44166..44852
Molecular Weight (calculated)
15875.6 Da
IEP (calculated)
4.141
GRAVY (calculated)
-0.104
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTALSSAI VNTSFLRRQQ TPISLRSLPL ANTQSLFGLK SSTARGGRVT CMATYKVKFI TPEGEQEVEC EDDVYVLDAA DEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ TDQSFLDDDQ MNEGYVLTCV AYPTSDVVIE THKEEAIV
101: GKVVSGSVDQ TDQSFLDDDQ MNEGYVLTCV AYPTSDVVIE THKEEAIV
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Arabidopsis Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.