Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P18450_001 | Banana | plastid | 73.17 | 60.0 |
| Bra023277.1-P | Field mustard | plastid | 82.93 | 56.98 |
| CDX93825 | Canola | plastid | 82.93 | 56.98 |
| CDY66059 | Canola | plastid | 81.3 | 55.87 |
| CDX84071 | Canola | plastid | 80.49 | 55.31 |
| AT1G32550.2 | Thale cress | plastid | 86.99 | 55.15 |
| VIT_02s0012g00980.t01 | Wine grape | plastid | 75.61 | 49.47 |
| Solyc08g077050.2.1 | Tomato | plastid | 76.42 | 49.21 |
| PGSC0003DMT400045201 | Potato | plastid | 76.42 | 49.21 |
| Os03t0685000-01 | Rice | plastid | 73.17 | 49.18 |
| KRH58205 | Soybean | mitochondrion, plastid | 71.54 | 49.16 |
| KRH04332 | Soybean | mitochondrion, plastid | 71.54 | 49.16 |
| TraesCS4D01G025700.1 | Wheat | plastid | 70.73 | 47.28 |
| TraesCS4A01G286700.1 | Wheat | plastid | 70.73 | 47.28 |
| TraesCS4B01G028100.1 | Wheat | plastid | 70.73 | 46.77 |
| EER93655 | Sorghum | plastid | 70.73 | 46.52 |
| Zm00001d013534_P002 | Maize | plastid | 69.92 | 44.79 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 74.8 | 41.63 |
| CDY20975 | Canola | plastid | 26.02 | 21.62 |
| CDY19334 | Canola | plastid | 23.58 | 20.86 |
| HORVU4Hr1G004210.8 | Barley | cytosol | 36.59 | 20.45 |
| CDY03773 | Canola | plastid | 24.39 | 20.27 |
| CDY12877 | Canola | plastid | 24.39 | 20.27 |
| CDY44833 | Canola | plastid | 24.39 | 20.27 |
| CDY46194 | Canola | plastid | 24.39 | 20.27 |
| CDY54579 | Canola | plastid | 24.39 | 20.27 |
| CDY54581 | Canola | plastid | 24.39 | 20.27 |
| CDY20591 | Canola | plastid | 24.39 | 20.27 |
| CDX71446 | Canola | plastid | 23.58 | 19.08 |
| CDX97925 | Canola | plastid | 22.76 | 18.92 |
| CDY29779 | Canola | plastid | 21.95 | 18.75 |
| CDY04500 | Canola | plastid | 22.76 | 18.42 |
| CDY33318 | Canola | plastid | 21.95 | 18.24 |
| CDX83271 | Canola | plastid | 22.76 | 18.18 |
| CDY31182 | Canola | plastid | 22.76 | 18.18 |
| CDY42796 | Canola | plastid | 21.95 | 17.88 |
| CDY30545 | Canola | plastid | 21.14 | 16.77 |
| CDX77119 | Canola | plastid | 21.14 | 16.67 |
| CDX69869 | Canola | plastid | 19.51 | 16.22 |
| CDY21622 | Canola | plastid | 19.51 | 16.11 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | GO:A0A078K1H2 | UniProt:A0A078K1H2 |
| InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY71732 | ProteinID:CDY71732 | ProteinID:CDY71732.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0022900 | GO:GO:0051536 | EnsemblPlantsGene:GSBRNA2T00019808001 | InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 |
| PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF10 | SUPFAM:SSF54292 | UniParc:UPI0004EF05AD | : |
Description
BnaAnng38620DBnaAnng38620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K1H2]
Coordinates
chrLK047196:+:116..1473
Molecular Weight (calculated)
13777.3 Da
IEP (calculated)
4.152
GRAVY (calculated)
-0.163
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMQEQYILH SAESQNINLP FACRHGCCTS CAVRVKSGDL RQPQALGISA ELKSQVIISL YLSEALTTYS TGYALLCVGF PTSDLEVETQ NEDEVYWLQF
101: GRYIARGPIE RDDYALELAM GDE
101: GRYIARGPIE RDDYALELAM GDE
001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEDQYIL HSAESQNISL PFACRHGCCT
101: SCAVRVKSGE LRQPQALGIS AELKSQRISS LDLIQCQKTY LTGYALLCVG FPTSDLEVET QDEDEVYWLQ FGRYFARGPI ERDDYALELA MGDE
101: SCAVRVKSGE LRQPQALGIS AELKSQRISS LDLIQCQKTY LTGYALLCVG FPTSDLEVET QDEDEVYWLQ FGRYFARGPI ERDDYALELA MGDE
Arabidopsis Description
FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.