Factsheet for Solyc08g077050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045201	Potato	plastid	96.86	96.86
VIT_02s0012g00980.t01	Wine grape	plastid	80.1	81.38
GSMUA_Achr5P18450_001	Banana	plastid	61.26	78.0
CDY71732	Canola	cytosol	49.21	76.42
Bra035490.1-P	Field mustard	plastid	69.11	73.74
CDX84071	Canola	plastid	69.11	73.74
CDY66059	Canola	plastid	69.11	73.74
Bra023277.1-P	Field mustard	plastid	67.54	72.07
CDX93825	Canola	plastid	67.54	72.07
Os03t0685000-01	Rice	plastid	68.06	71.04
KRH58205	Soybean	mitochondrion, plastid	64.92	69.27
KRH04332	Soybean	mitochondrion, plastid	64.4	68.72
AT1G32550.2	Thale cress	plastid	69.63	68.56
TraesCS4A01G286700.1	Wheat	plastid	62.83	65.22
TraesCS4D01G025700.1	Wheat	plastid	62.3	64.67
TraesCS4B01G028100.1	Wheat	plastid	62.3	63.98
EER93655	Sorghum	plastid	62.3	63.64
Zm00001d013534_P002	Maize	plastid	62.3	61.98
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	65.97	57.01
Solyc05g055280.1.1	Tomato	cytosol	19.9	38.78
Solyc01g103920.2.1	Tomato	plastid	23.56	32.14
Solyc11g068430.1.1	Tomato	nucleus	20.42	31.45
Solyc04g009710.1.1	Tomato	plastid	24.61	30.52
Solyc11g006910.1.1	Tomato	mitochondrion, plastid	19.9	30.4
Solyc10g044520.1.1	Tomato	plastid	21.47	28.47
HORVU4Hr1G004210.8	Barley	cytosol	31.41	27.27
Solyc10g075160.1.1	Tomato	plastid	19.9	26.39
Solyc03g005190.2.1	Tomato	nucleus	21.47	13.99

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	InterPro:IPR001041	InterPro:IPR012675	UniProt:K4CN65
PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF10	SUPFAM:SSF54292	EnsemblPlantsGene:Solyc08g077050.2
EnsemblPlants:Solyc08g077050.2.1	UniParc:UPI000276C0C6	:	:	:	:

Description

No Description!

Coordinates

chr8:+:60988723..60993786

Molecular Weight (calculated)

21118.1 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.303

Length

191 amino acids

Sequence
(BLAST)

001: MDLQSPCSAC TSLHRKPPLG RRLFSLNSVN FPLNSVKCRR NTTPKVQTPV AVAVSGQNGS SYSPSVPTHK VTVLDRQRGV VHEFLVPEDQ YILHTAEAQN
101: ITLPFACRHG CCTSCAVRVK SGELRQPEAL GISAELKSKG YALLCVGFPS SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Best Arabidopsis Sequence Match ( AT1G32550.1 )
(BLAST)

001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Arabidopsis Description

FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.