Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g055280.1.1 | Tomato | cytosol | 42.86 | 67.35 |
| Bra009066.1-P | Field mustard | cytosol | 40.91 | 64.29 |
| Solyc11g006910.1.1 | Tomato | mitochondrion, plastid | 50.65 | 62.4 |
| Solyc11g068430.1.1 | Tomato | nucleus | 44.81 | 55.65 |
| Os05t0443500-01 | Rice | plastid | 49.35 | 51.35 |
| TraesCS1B01G285500.1 | Wheat | plastid | 46.1 | 47.02 |
| CDY21622 | Canola | plastid | 45.45 | 46.98 |
| HORVU3Hr1G084210.1 | Barley | plastid | 45.45 | 46.98 |
| TraesCS3A01G373900.1 | Wheat | mitochondrion | 42.86 | 46.48 |
| TraesCS1A01G276300.1 | Wheat | plastid | 45.45 | 46.36 |
| CDX69869 | Canola | plastid | 44.16 | 45.95 |
| Solyc01g103920.2.1 | Tomato | plastid | 41.56 | 45.71 |
| Os01t0860601-01 | Rice | plastid | 48.7 | 45.45 |
| Zm00001d012293_P001 | Maize | plastid | 43.51 | 45.27 |
| Solyc10g044520.1.1 | Tomato | plastid | 42.21 | 45.14 |
| Zm00001d038291_P001 | Maize | plastid | 44.81 | 44.81 |
| AT5G10000.1 | Thale cress | plastid | 42.86 | 44.59 |
| TraesCS3B01G406100.1 | Wheat | plastid | 44.16 | 44.16 |
| TraesCS3D01G366600.1 | Wheat | plastid | 44.16 | 44.16 |
| EES19611 | Sorghum | plastid | 46.1 | 43.83 |
| Zm00001d010136_P001 | Maize | plastid | 43.51 | 43.51 |
| Solyc10g075160.1.1 | Tomato | plastid | 39.61 | 42.36 |
| EES01793 | Sorghum | plastid | 44.16 | 41.21 |
| TraesCS1D01G275800.2 | Wheat | plastid | 46.75 | 27.38 |
| Solyc08g077050.2.1 | Tomato | plastid | 30.52 | 24.61 |
| Solyc03g005190.2.1 | Tomato | nucleus | 29.87 | 15.7 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf |
| InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 |
| GO:GO:0051537 | GO:GO:0055114 | InterPro:IPR001041 | InterPro:IPR012675 | UniProt:K4BPC6 | PFAM:PF00111 |
| ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF7 | SUPFAM:SSF54292 | EnsemblPlantsGene:Solyc04g009710.1 |
| EnsemblPlants:Solyc04g009710.1.1 | TIGRFAMs:TIGR02008 | UniParc:UPI0002765A0D | : | : | : |
Description
Probable ferredoxin-4, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G10000) UniProtKB/Swiss-Prot;Acc:Q9FIA7]
Coordinates
chr4:+:3049930..3051029
Molecular Weight (calculated)
16867.2 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.244
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSKISIPSS NYLLKDAPST KSFAFTKKHP CTLGSLKSIS KAFGLNCISK FKVSTMALHK VKLIDPNGIE NKIEVPDDRY ILDTAEDVGK ELPYSCRAGT
101: CGTCAGQLSS GSVDQSEGSF LDENLIEKGY VLTCISYPRE DCVVYTHKQD EVLN
101: CGTCAGQLSS GSVDQSEGSF LDENLIEKGY VLTCISYPRE DCVVYTHKQD EVLN
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.