Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G276300.1 | Wheat | plastid | 84.46 | 82.78 |
| TraesCS1B01G285500.1 | Wheat | plastid | 83.78 | 82.12 |
| Zm00001d038291_P001 | Maize | plastid | 75.0 | 72.08 |
| EES19611 | Sorghum | plastid | 77.03 | 70.37 |
| Zm00001d010136_P001 | Maize | plastid | 72.3 | 69.48 |
| Solyc05g055280.1.1 | Tomato | cytosol | 44.59 | 67.35 |
| Os07t0251500-00 | Rice | cytosol | 42.57 | 63.0 |
| Os03t0835900-01 | Rice | plastid | 60.81 | 58.82 |
| Bra009066.1-P | Field mustard | cytosol | 38.51 | 58.16 |
| Solyc11g006910.1.1 | Tomato | mitochondrion, plastid | 47.97 | 56.8 |
| PGSC0003DMT400060121 | Potato | plastid | 56.76 | 56.0 |
| Os01t0860601-01 | Rice | plastid | 62.16 | 55.76 |
| PGSC0003DMT400061612 | Potato | plastid | 54.73 | 54.0 |
| Solyc04g009710.1.1 | Tomato | plastid | 51.35 | 49.35 |
| Os04t0412200-01 | Rice | plastid | 50.0 | 48.68 |
| TraesCS1D01G275800.2 | Wheat | plastid | 84.46 | 47.53 |
| Os08t0104600-02 | Rice | extracellular | 42.57 | 45.32 |
| CDY21622 | Canola | plastid | 43.92 | 43.62 |
| CDX69869 | Canola | plastid | 41.22 | 41.22 |
| AT5G10000.1 | Thale cress | plastid | 40.54 | 40.54 |
| Os03t0659200-01 | Rice | plastid | 25.68 | 25.85 |
| Os03t0685000-01 | Rice | plastid | 30.41 | 24.59 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | EntrezGene:4338930 |
| ProteinID:AAU90104.1 | ProteinID:AAV24967.1 | EMBL:AK103416 | ProteinID:BAA06456.1 | ProteinID:BAF17589.1 | ProteinID:BAS94263.1 |
| InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0048193 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | InterPro:IPR001041 | InterPro:IPR012675 | EnsemblPlantsGene:Os05g0443500 | EnsemblPlants:Os05t0443500-01 | PFAM:PF00111 |
| ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF11 | UniProt:Q40684 | SUPFAM:SSF54292 |
| TIGRFAMs:TIGR02008 | UniParc:UPI00000A4914 | RefSeq:XP_015639074.1 | : | : | : |
Description
ferredoxin, Ferredoxin B1, ferredoxin 4Similar to Ferredoxin VI, chloroplast precursor (Fd VI). (Os05t0443500-01)
Coordinates
chr5:-:21705751..21707086
Molecular Weight (calculated)
15811.7 Da
IEP (calculated)
4.966
GRAVY (calculated)
-0.184
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MATATAPRLC FPKPGAAIAP ATKSPSFIGY AKQTLNMSGL RISNKFRVSA TAVHKVKLIG PDGVEHEFEA PEDTYILEAA ETAGVELPFS CRAGSCSTCA
101: GKMSSGEVDQ SEGSFLDENQ MGEGYVLTCI SYPKADCVIH THKEEELY
101: GKMSSGEVDQ SEGSFLDENQ MGEGYVLTCI SYPKADCVIH THKEEELY
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.