Factsheet for Os03t0659200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033469_P001	Maize	plastid	81.63	80.0
EER93719	Sorghum	plastid	80.27	79.19
TraesCS4B01G015800.1	Wheat	plastid	72.79	75.35
TraesCS4D01G014200.1	Wheat	plastid	75.51	74.0
TraesCS4A01G297900.1	Wheat	plastid	73.47	73.97
HORVU4Hr1G002520.1	Barley	plastid	74.15	73.65
KRH77855	Soybean	plastid	57.82	57.82
KRH27637	Soybean	mitochondrion, plastid	56.46	56.46
VIT_05s0020g03490.t01	Wine grape	plastid	54.42	54.42
PGSC0003DMT400086140	Potato	plastid	55.1	54.0
CDY29779	Canola	plastid	51.7	52.78
AT4G14890.1	Thale cress	plastid	55.1	52.6
Bra036911.1-P	Field mustard	plastid	52.38	50.99
CDY42796	Canola	plastid	51.7	50.33
Os07t0251500-00	Rice	cytosol	24.49	36.0
Os08t0104600-02	Rice	extracellular	28.57	30.22
Solyc03g005190.2.1	Tomato	nucleus	56.46	28.33
Os03t0835900-01	Rice	plastid	29.25	28.1
Os01t0860601-01	Rice	plastid	30.61	27.27
Os05t0443500-01	Rice	plastid	25.85	25.68
Os04t0412200-01	Rice	plastid	25.85	25.0
Os03t0685000-01	Rice	plastid	25.85	20.77

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	EntrezGene:4333624	ProteinID:AAO23095.1
ProteinID:ABF97999.1	EMBL:AK062598	EMBL:AK105700	ProteinID:BAF12731.1	ProteinID:BAS85577.1	InterPro:Beta-grasp_dom_sf
InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009644	GO:GO:0009987	GO:GO:0022900
GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675
EnsemblPlantsGene:Os03g0659200	EnsemblPlants:Os03t0659200-01	PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF9
UniProt:Q850T5	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0000002D10	RefSeq:XP_015627997.1	SEG:seg

Description

ferredoxin-like protein with C-terminal extension 1Similar to Ferredoxin. (Os03t0659200-01);Similar to Ferredoxin. (Os03t0659200-02);Similar to ferredoxin. (Os03t0659200-03)

Coordinates

chr3:+:25800415..25801209

Molecular Weight (calculated)

15490.5 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.027

Length

147 amino acids

Sequence
(BLAST)

001: MAAAAASLLH LATSACSPPR VRLVGPTTGR RSPLRAAPAP PPPRAYKVTI EHGGESRVVE VEEGETILSR ALDEGIDVPH DCKLGVCMTC PARLVAGEVD
101: QSDGMLSDDV VAQGYALLCA SYPRSDCTIR VIPEDELLKV QLATADD

Best Arabidopsis Sequence Match ( AT4G14890.1 )
(BLAST)

001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND

Arabidopsis Description

FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.