Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27637 | Soybean | mitochondrion, plastid | 89.8 | 89.8 |
| VIT_05s0020g03490.t01 | Wine grape | plastid | 70.07 | 70.07 |
| PGSC0003DMT400086140 | Potato | plastid | 68.03 | 66.67 |
| CDY29779 | Canola | plastid | 62.59 | 63.89 |
| CDY42796 | Canola | plastid | 65.31 | 63.58 |
| EER93719 | Sorghum | plastid | 63.95 | 63.09 |
| AT4G14890.1 | Thale cress | plastid | 65.99 | 62.99 |
| Bra036911.1-P | Field mustard | plastid | 63.95 | 62.25 |
| Zm00001d033469_P001 | Maize | plastid | 63.27 | 62.0 |
| TraesCS4B01G015800.1 | Wheat | plastid | 57.14 | 59.15 |
| TraesCS4A01G297900.1 | Wheat | plastid | 58.5 | 58.9 |
| HORVU4Hr1G002520.1 | Barley | plastid | 58.5 | 58.11 |
| Os03t0659200-01 | Rice | plastid | 57.82 | 57.82 |
| TraesCS4D01G014200.1 | Wheat | plastid | 58.5 | 57.33 |
| KRH44081 | Soybean | cytosol | 25.85 | 37.62 |
| Solyc03g005190.2.1 | Tomato | nucleus | 66.67 | 33.45 |
| KRH26360 | Soybean | nucleus, plastid | 31.29 | 31.29 |
| KRH59154 | Soybean | nucleus, plastid | 29.93 | 29.93 |
| KRH43040 | Soybean | nucleus, plastid | 29.25 | 29.86 |
| KRH26361 | Soybean | nucleus | 29.25 | 29.25 |
| KRG90740 | Soybean | plastid | 30.61 | 29.22 |
| KRH36019 | Soybean | plastid | 29.93 | 28.57 |
| KRH25235 | Soybean | plastid | 28.57 | 27.81 |
| KRH30423 | Soybean | plastid | 28.57 | 27.1 |
| KRH26359 | Soybean | mitochondrion, plastid | 29.25 | 24.71 |
| KRH58205 | Soybean | mitochondrion, plastid | 26.53 | 21.79 |
| KRH04332 | Soybean | mitochondrion, plastid | 26.53 | 21.79 |
Protein Annotations
| EntrezGene:100500300 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | EMBL:ACUP02000685 |
| EMBL:BT091216 | InterPro:Beta-grasp_dom_sf | UniProt:C6T1B0 | EnsemblPlantsGene:GLYMA_01G238000 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004128 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | InterPro:IPR001041 | InterPro:IPR012675 | EnsemblPlants:KRH77855 |
| ProteinID:KRH77855 | ProteinID:KRH77855.1 | PFAM:PF00111 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF9 |
| SUPFAM:SSF54292 | UniParc:UPI0001B157C4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:56259512..56260329
Molecular Weight (calculated)
16115.3 Da
IEP (calculated)
5.206
GRAVY (calculated)
-0.307
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLQLTTTP FTLLRQQRQH PTKKKSTASQ LNPPRPRPLR VSVRSYKVVI EHDGESTEVE VEPDETILSK ALDSGLSVPH DCKLGVCMTC PARLISGSVD
101: QSDGMLSDDV VERGYALLCA AYPQSDCHIK IIPEDELLSL QLATAND
101: QSDGMLSDDV VERGYALLCA AYPQSDCHIK IIPEDELLSL QLATAND
001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
Arabidopsis Description
FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.