Factsheet for AT4G14890.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29779	Canola	plastid	83.77	89.58
Bra036911.1-P	Field mustard	plastid	86.36	88.08
CDY42796	Canola	plastid	83.77	85.43
KRH27637	Soybean	mitochondrion, plastid	64.29	67.35
KRH77855	Soybean	plastid	62.99	65.99
PGSC0003DMT400086140	Potato	plastid	61.69	63.33
VIT_05s0020g03490.t01	Wine grape	plastid	60.39	63.27
Zm00001d033469_P001	Maize	plastid	56.49	58.0
EER93719	Sorghum	plastid	54.55	56.38
Os03t0659200-01	Rice	plastid	52.6	55.1
TraesCS4B01G015800.1	Wheat	plastid	49.35	53.52
TraesCS4A01G297900.1	Wheat	plastid	48.7	51.37
HORVU4Hr1G002520.1	Barley	plastid	48.7	50.68
TraesCS4D01G014200.1	Wheat	plastid	49.35	50.67
AT2G27510.1	Thale cress	plastid	33.12	32.9
Solyc03g005190.2.1	Tomato	nucleus	61.04	32.08
AT1G10960.1	Thale cress	plastid	29.87	31.08
AT1G60950.1	Thale cress	plastid	29.22	30.41
AT5G10000.1	Thale cress	plastid	25.32	26.35
AT1G32550.2	Thale cress	plastid	24.03	19.07

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	EntrezGene:827146	UniProt:A0A178USA2
ProteinID:AEE83516.1	ArrayExpress:AT4G14890	EnsemblPlantsGene:AT4G14890	RefSeq:AT4G14890	TAIR:AT4G14890	RefSeq:AT4G14890-TAIR-G
EnsemblPlants:AT4G14890.1	TAIR:AT4G14890.1	EMBL:AY058112	EMBL:AY086239	EMBL:AY101536	InterPro:Beta-grasp_dom_sf
ProteinID:CAB10268.1	ProteinID:CAB78531.1	Symbol:FdC2	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009644	GO:GO:0009987	GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537
GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675	RefSeq:NP_193225.1	UniProt:O23344	ProteinID:OAO96708.1
PFAM:PF00111	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF9	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	UniParc:UPI00000A67BB	:	:	:	:

Description

FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]

Coordinates

chr4:+:8520819..8521506

Molecular Weight (calculated)

16733.0 Da

IEP (calculated)

4.460

GRAVY (calculated)

-0.094

Length

154 amino acids

Sequence
(BLAST)

001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.