Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77855 | Soybean | plastid | 70.07 | 70.07 |
| KRH27637 | Soybean | mitochondrion, plastid | 68.71 | 68.71 |
| PGSC0003DMT400086140 | Potato | plastid | 68.71 | 67.33 |
| CDY29779 | Canola | plastid | 59.18 | 60.42 |
| AT4G14890.1 | Thale cress | plastid | 63.27 | 60.39 |
| Zm00001d033469_P001 | Maize | plastid | 60.54 | 59.33 |
| EER93719 | Sorghum | plastid | 59.18 | 58.39 |
| CDY42796 | Canola | plastid | 59.86 | 58.28 |
| TraesCS4B01G015800.1 | Wheat | plastid | 55.78 | 57.75 |
| Bra036911.1-P | Field mustard | plastid | 59.18 | 57.62 |
| HORVU4Hr1G002520.1 | Barley | plastid | 57.82 | 57.43 |
| TraesCS4A01G297900.1 | Wheat | plastid | 56.46 | 56.85 |
| TraesCS4D01G014200.1 | Wheat | plastid | 56.46 | 55.33 |
| Os03t0659200-01 | Rice | plastid | 54.42 | 54.42 |
| Solyc03g005190.2.1 | Tomato | nucleus | 68.03 | 34.13 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 31.97 | 33.1 |
| VIT_13s0147g00110.t01 | Wine grape | plastid | 29.25 | 25.6 |
| VIT_02s0012g00980.t01 | Wine grape | plastid | 30.61 | 23.94 |
| VIT_06s0080g00410.t01 | Wine grape | plastid | 29.25 | 23.89 |
Protein Annotations
| EntrezGene:100244206 | wikigene:100244206 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 |
| EMBL:AM448952 | InterPro:Beta-grasp_dom_sf | ProteinID:CAN69765 | ProteinID:CAN69765.1 | ProteinID:CCB50426 | ProteinID:CCB50426.1 |
| UniProt:F6HDQ5 | EMBL:FN595749 | InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009644 |
| GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 | GO:GO:0055114 |
| InterPro:IPR001041 | InterPro:IPR012675 | EntrezGene:LOC100244206 | wikigene:LOC100244206 | PFAM:PF00111 | PFscan:PS51085 |
| PANTHER:PTHR43112 | PANTHER:PTHR43112:SF9 | SUPFAM:SSF54292 | TIGR:TC65350 | TIGRFAMs:TIGR02008 | UniParc:UPI00019832F7 |
| ArrayExpress:VIT_05s0020g03490 | EnsemblPlantsGene:VIT_05s0020g03490 | EnsemblPlants:VIT_05s0020g03490.t01 | unigene:Vvi.5868 | RefSeq:XP_002282517 | RefSeq:XP_002282517.1 |
Description
Ferredoxin [Source:UniProtKB/TrEMBL;Acc:F6HDQ5]
Coordinates
chr5:-:5264210..5264834
Molecular Weight (calculated)
16270.6 Da
IEP (calculated)
5.222
GRAVY (calculated)
-0.210
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLHFTTSP SFTLTKQVQL TKLPTFQIRP RPRPNSRQLS LRVQAYKVVI DHEGKTTELE VEEDESILGK ALDTGLSVPH DCKLGVCMTC PARLVSGTID
101: QSEGMLSDDV VERGYALLCV AYPRSDCHIK TIPEEELLSL QLATAND
101: QSEGMLSDDV VERGYALLCV AYPRSDCHIK TIPEEELLSL QLATAND
001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
Arabidopsis Description
FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.