Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g03490.t01 | Wine grape | plastid | 67.33 | 68.71 |
| KRH77855 | Soybean | plastid | 66.67 | 68.03 |
| KRH27637 | Soybean | mitochondrion, plastid | 64.67 | 65.99 |
| CDY29779 | Canola | plastid | 61.33 | 63.89 |
| AT4G14890.1 | Thale cress | plastid | 63.33 | 61.69 |
| CDY42796 | Canola | plastid | 62.0 | 61.59 |
| Bra036911.1-P | Field mustard | plastid | 61.33 | 60.93 |
| Zm00001d033469_P001 | Maize | plastid | 58.67 | 58.67 |
| EER93719 | Sorghum | plastid | 58.0 | 58.39 |
| TraesCS4A01G297900.1 | Wheat | plastid | 54.0 | 55.48 |
| Os03t0659200-01 | Rice | plastid | 54.0 | 55.1 |
| TraesCS4B01G015800.1 | Wheat | plastid | 52.0 | 54.93 |
| HORVU4Hr1G002520.1 | Barley | plastid | 52.67 | 53.38 |
| TraesCS4D01G014200.1 | Wheat | plastid | 53.33 | 53.33 |
| Solyc03g005190.2.1 | Tomato | nucleus | 96.0 | 49.15 |
| PGSC0003DMT400060121 | Potato | plastid | 34.67 | 34.67 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 24.0 | 34.62 |
| PGSC0003DMT400061612 | Potato | plastid | 34.0 | 34.0 |
| PGSC0003DMT400011522 | Potato | plastid | 28.67 | 31.62 |
| PGSC0003DMT400067774 | Potato | plastid | 29.33 | 29.33 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 28.0 | 29.17 |
| PGSC0003DMT400015058 | Potato | plastid | 29.33 | 29.14 |
| PGSC0003DMT400045201 | Potato | plastid | 28.0 | 21.99 |
Protein Annotations
| EntrezGene:102590683 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | InterPro:Beta-grasp_dom_sf |
| InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 |
| GO:GO:0051537 | GO:GO:0055114 | InterPro:IPR001041 | InterPro:IPR012675 | UniProt:M1DB25 | PFAM:PF00111 |
| EnsemblPlantsGene:PGSC0003DMG400035711 | PGSC:PGSC0003DMG400035711 | EnsemblPlants:PGSC0003DMT400086140 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF9 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI000295692C | RefSeq:XP_006356035.1 | : | : |
Description
Ferredoxin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400035711]
Coordinates
chr3:-:293621..294073
Molecular Weight (calculated)
16442.8 Da
IEP (calculated)
4.657
GRAVY (calculated)
-0.091
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIQLTTSP SFTLIPSRKQ GNLAAIKLNN PWSVRRTENC RVSSVVRAYK VIVEHEGKTT ELEVEPDETI LSKALDVGMS VPYDCKLGVC MTCPAKLLSG
101: NVDQSEGMLS DDVVERGYAL LCAAYPRSDC HIRVIPEEEL LSLQLATADD
101: NVDQSEGMLS DDVVERGYAL LCAAYPRSDC HIRVIPEEEL LSLQLATADD
001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
Arabidopsis Description
FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.