Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 9
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G297900.1 | Wheat | plastid | 89.19 | 90.41 |
| TraesCS4B01G015800.1 | Wheat | plastid | 84.46 | 88.03 |
| TraesCS4D01G014200.1 | Wheat | plastid | 89.19 | 88.0 |
| Os03t0659200-01 | Rice | plastid | 73.65 | 74.15 |
| Zm00001d033469_P001 | Maize | plastid | 75.0 | 74.0 |
| EER93719 | Sorghum | plastid | 73.65 | 73.15 |
| KRH77855 | Soybean | plastid | 58.11 | 58.5 |
| VIT_05s0020g03490.t01 | Wine grape | plastid | 57.43 | 57.82 |
| KRH27637 | Soybean | mitochondrion, plastid | 57.43 | 57.82 |
| PGSC0003DMT400086140 | Potato | plastid | 53.38 | 52.67 |
| CDY29779 | Canola | plastid | 50.0 | 51.39 |
| Bra036911.1-P | Field mustard | plastid | 50.0 | 49.01 |
| CDY42796 | Canola | plastid | 50.0 | 49.01 |
| AT4G14890.1 | Thale cress | plastid | 50.68 | 48.7 |
| HORVU7Hr1G077750.1 | Barley | plastid | 28.38 | 29.79 |
| HORVU3Hr1G084210.1 | Barley | plastid | 29.73 | 29.53 |
| HORVU7Hr1G077740.1 | Barley | plastid | 28.38 | 29.37 |
| HORVU2Hr1G072880.1 | Barley | plastid | 29.05 | 28.48 |
| Solyc03g005190.2.1 | Tomato | nucleus | 55.41 | 27.99 |
| HORVU5Hr1G117910.3 | Barley | plastid | 28.38 | 18.03 |
| HORVU4Hr1G004210.8 | Barley | cytosol | 20.27 | 13.64 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009644 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 |
| GO:GO:0051536 | GO:GO:0051537 | GO:GO:0055114 | EnsemblPlantsGene:HORVU4Hr1G002520 | EnsemblPlants:HORVU4Hr1G002520.1 | InterPro:IPR001041 |
| InterPro:IPR012675 | UniProt:M0VYW3 | PFAM:PF00111 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF9 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0002962D5C | SEG:seg | : | : |
Description
Ferredoxin [Source:UniProtKB/TrEMBL;Acc:M0VYW3]
Coordinates
chrchr4H:-:4852471..4853085
Molecular Weight (calculated)
16010.1 Da
IEP (calculated)
5.548
GRAVY (calculated)
-0.192
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATLLHLA ASVSSPRLHL GRNSATSPLG RHHPQARLRA AARPRAYRVT IEHGGESRVV EMEEDENILE RALEEGLDVP HDCKLGVCMT CPARLVSGKV
101: DQSDGMLSDD VVAQGYALLC AAYPRSDCTI RVIPEDELLQ VQLATAND
101: DQSDGMLSDD VVAQGYALLC AAYPRSDCTI RVIPEDELLQ VQLATAND
001: MATLPLPTQT STISLPKPYL SNSFSFPLRN ATLSTTTNRR NFLTTGRIIA RAYKVVVEHD GKTTELEVEP DETILSKALD SGLDVPYDCN LGVCMTCPAK
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
101: LVTGTVDQSG GMLSDDVVER GYTLLCASYP TSDCHIKMIP EEELLSLQLA TAND
Arabidopsis Description
FdC2Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.