Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G286700.1 | Wheat | plastid | 31.36 | 37.5 |
| TraesCS4B01G028100.1 | Wheat | plastid | 31.36 | 37.1 |
| CDY71732 | Canola | cytosol | 20.45 | 36.59 |
| TraesCS4D01G025700.1 | Wheat | plastid | 30.0 | 35.87 |
| GSMUA_Achr5P18450_001 | Banana | plastid | 24.09 | 35.33 |
| Os03t0685000-01 | Rice | plastid | 29.09 | 34.97 |
| KRH58205 | Soybean | mitochondrion, plastid | 27.73 | 34.08 |
| KRH04332 | Soybean | mitochondrion, plastid | 26.82 | 32.96 |
| EER93655 | Sorghum | plastid | 27.73 | 32.62 |
| VIT_02s0012g00980.t01 | Wine grape | plastid | 27.27 | 31.91 |
| CDY66059 | Canola | plastid | 25.91 | 31.84 |
| Bra035490.1-P | Field mustard | plastid | 25.91 | 31.84 |
| Zm00001d013534_P002 | Maize | plastid | 27.73 | 31.77 |
| Solyc08g077050.2.1 | Tomato | plastid | 27.27 | 31.41 |
| PGSC0003DMT400045201 | Potato | plastid | 27.27 | 31.41 |
| CDX84071 | Canola | plastid | 25.45 | 31.28 |
| Bra023277.1-P | Field mustard | plastid | 25.0 | 30.73 |
| CDX93825 | Canola | plastid | 25.0 | 30.73 |
| AT1G32550.2 | Thale cress | plastid | 25.0 | 28.35 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 27.27 | 27.15 |
| HORVU7Hr1G077750.1 | Barley | plastid | 16.36 | 25.53 |
| HORVU7Hr1G077740.1 | Barley | plastid | 15.91 | 24.48 |
| HORVU2Hr1G072880.1 | Barley | plastid | 15.45 | 22.52 |
| HORVU3Hr1G084210.1 | Barley | plastid | 14.55 | 21.48 |
| HORVU4Hr1G002520.1 | Barley | plastid | 13.64 | 20.27 |
| HORVU5Hr1G117910.3 | Barley | plastid | 13.64 | 12.88 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | MapMan:35.1 | UniProt:A0A287MZQ4 | InterPro:Beta-grasp_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | EnsemblPlantsGene:HORVU4Hr1G004210 | EnsemblPlants:HORVU4Hr1G004210.8 |
| InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF10 | SUPFAM:SSF54292 |
| UniParc:UPI000B483324 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:9657276..9660218
Molecular Weight (calculated)
24111.1 Da
IEP (calculated)
11.061
GRAVY (calculated)
-0.643
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: NEGKETCLIR SEPTKGEESQ LRPDLGILPL PLLLLRALRR PQAGRQAVQG QDGGVPRRDH GSRGSSARRR RPLEEKRPRA PGPRHEHGGA RLGAAAGHHP
101: GTGRRRPDPQ GDRPRPGARG RPPVRRAPED QYILHTAEAQ DITLPFACRH GCCTSCAVRI KSGQIRQPEA LGISADLREQ VNPLSYTYMP SLIGIRSSCS
201: FLILLKSLCA VLQLLSHDLI
101: GTGRRRPDPQ GDRPRPGARG RPPVRRAPED QYILHTAEAQ DITLPFACRH GCCTSCAVRI KSGQIRQPEA LGISADLREQ VNPLSYTYMP SLIGIRSSCS
201: FLILLKSLCA VLQLLSHDLI
001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E
Arabidopsis Description
FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.