Factsheet for Os03t0685000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18450_001	Banana	plastid	64.48	78.67
TraesCS4A01G286700.1	Wheat	plastid	76.5	76.09
TraesCS4B01G028100.1	Wheat	plastid	76.5	75.27
TraesCS4D01G025700.1	Wheat	plastid	75.41	75.0
EER93655	Sorghum	plastid	76.5	74.87
Zm00001d013534_P002	Maize	plastid	77.05	73.44
CDY71732	Canola	cytosol	49.18	73.17
KRH58205	Soybean	mitochondrion, plastid	68.85	70.39
KRH04332	Soybean	mitochondrion, plastid	68.31	69.83
Bra035490.1-P	Field mustard	plastid	66.67	68.16
Solyc08g077050.2.1	Tomato	plastid	71.04	68.06
CDX84071	Canola	plastid	66.12	67.6
CDY66059	Canola	plastid	66.12	67.6
VIT_02s0012g00980.t01	Wine grape	plastid	69.4	67.55
PGSC0003DMT400045201	Potato	plastid	70.49	67.54
Bra023277.1-P	Field mustard	plastid	65.03	66.48
CDX93825	Canola	plastid	65.03	66.48
AT1G32550.2	Thale cress	plastid	64.48	60.82
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	69.95	57.92
Os07t0251500-00	Rice	cytosol	19.67	36.0
Os05t0443500-01	Rice	plastid	24.59	30.41
Os08t0104600-02	Rice	extracellular	22.4	29.5
HORVU4Hr1G004210.8	Barley	cytosol	34.97	29.09
Os03t0835900-01	Rice	plastid	22.95	27.45
Os01t0860601-01	Rice	plastid	23.5	26.06
Os03t0659200-01	Rice	plastid	20.77	25.85
Os04t0412200-01	Rice	plastid	18.58	22.37

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	EntrezGene:4333746	ProteinID:AAK14422.1
ProteinID:ABF98249.1	EMBL:AK059896	EMBL:AK098989	EMBL:AK099303	ProteinID:BAF12837.1	ProteinID:BAS85794.1
InterPro:Beta-grasp_dom_sf	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0022900	GO:GO:0046872
GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlantsGene:Os03g0685000
EnsemblPlants:Os03t0685000-01	PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF10	UniProt:Q10F16
SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI00000A80AA	RefSeq:XP_015629147.1	SEG:seg	:

Description

HEADING DATE DELAY AND YELLOWISH LEAF 1Similar to Ferredoxin. (Os03t0685000-01)

Coordinates

chr3:+:27309857..27312902

Molecular Weight (calculated)

19926.4 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.372

Length

183 amino acids

Sequence
(BLAST)

001: MAPCPAATTT RIGAPPFAAT TARRPARGAT TTTKARASGL RQVEGPVSER AYSSSSPAPT HKVTVHDRQR GVVHEFVVPQ DQYILHTAEA QDITLPFACR
101: HGCCTSCAVR IKSGQIRQPE ALGISAELKD KGYALLCVGF PTSDVEVETQ DEDEVYWLQF GRYFARGPVE RDDYALELAM GDE

Best Arabidopsis Sequence Match ( AT1G32550.1 )
(BLAST)

001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Arabidopsis Description

FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.