Factsheet for GSMUA_Achr11P00450_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18450_001	Banana	plastid	62.9	92.67
CDY71732	Canola	cytosol	41.63	74.8
Os03t0685000-01	Rice	plastid	57.92	69.95
VIT_02s0012g00980.t01	Wine grape	plastid	59.28	69.68
EER93655	Sorghum	plastid	57.01	67.38
Bra035490.1-P	Field mustard	plastid	53.85	66.48
Zm00001d013534_P002	Maize	plastid	57.47	66.15
Solyc08g077050.2.1	Tomato	plastid	57.01	65.97
PGSC0003DMT400045201	Potato	plastid	57.01	65.97
CDY66059	Canola	plastid	53.39	65.92
CDX84071	Canola	plastid	53.39	65.92
Bra023277.1-P	Field mustard	plastid	52.94	65.36
CDX93825	Canola	plastid	52.94	65.36
KRH58205	Soybean	mitochondrion, plastid	52.49	64.8
TraesCS4D01G025700.1	Wheat	plastid	52.94	63.59
KRH04332	Soybean	mitochondrion, plastid	51.13	63.13
TraesCS4A01G286700.1	Wheat	plastid	52.49	63.04
TraesCS4B01G028100.1	Wheat	plastid	52.94	62.9
AT1G32550.2	Thale cress	plastid	52.94	60.31
GSMUA_Achr8P32490_001	Banana	cytosol	12.22	39.13
GSMUA_Achr5P00940_001	Banana	cytosol	16.74	37.76
GSMUA_Achr11P...	Banana	cytosol	14.48	31.68
HORVU4Hr1G004210.8	Barley	cytosol	27.15	27.27
GSMUA_Achr5P01200_001	Banana	plastid	16.74	25.87
GSMUA_Achr11P...	Banana	plastid	18.1	15.15

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	EnsemblPlantsGene:GSMUA_Achr11G00450_001	EnsemblPlants:GSMUA_Achr11P00450_001	EnsemblPlants:GSMUA_Achr11T00450_001
InterPro:IPR001041	InterPro:IPR012675	UniProt:M0RN76	PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112
PANTHER:PTHR43112:SF10	SUPFAM:SSF54292	UniParc:UPI0002956CF4	SEG:seg	:	:

Description

Putative Ferredoxin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G00450_001]

Coordinates

chr11:+:267946..273546

Molecular Weight (calculated)

24287.9 Da

IEP (calculated)

5.528

GRAVY (calculated)

-0.053

Length

221 amino acids

Sequence
(BLAST)

001: MYTSFLPNFV DLICNDFEGK ANTVVLLALM MHAAAMVLSI PSSSSSCCHS NCLLSWQLAN TKPLLHLCRK PSTAVRAELQ TSEPTAATAS SSSSSIPTHR
101: VTVHDRQRGV VHEFLVPEDQ YILHTAESQN ISLPFACRHG CCTSCAVRVK SGQIRQPEAL GISAELKAKG YALLCVGFPS SDIEVETQDE DEVYWLQFGR
201: YFARGPIERD DYALELAMGD E

Best Arabidopsis Sequence Match ( AT1G32550.1 )
(BLAST)

001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Arabidopsis Description

FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.