Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P00940_001 | Banana | cytosol | 81.19 | 83.67 |
| Os07t0251500-00 | Rice | cytosol | 62.38 | 63.0 |
| TraesCS1B01G416500.1 | Wheat | cytosol | 60.4 | 62.89 |
| GSMUA_Achr8P32490_001 | Banana | cytosol | 41.58 | 60.87 |
| Solyc11g068430.1.1 | Tomato | nucleus | 73.27 | 59.68 |
| EER93144 | Sorghum | plastid | 81.19 | 54.3 |
| Zm00001d034760_P001 | Maize | mitochondrion, plastid | 80.2 | 53.29 |
| Os03t0835900-01 | Rice | plastid | 79.21 | 52.29 |
| PGSC0003DMT400015058 | Potato | plastid | 77.23 | 51.66 |
| KRH25235 | Soybean | plastid | 75.25 | 50.33 |
| PGSC0003DMT400067774 | Potato | plastid | 72.28 | 48.67 |
| KRH30423 | Soybean | plastid | 74.26 | 48.39 |
| TraesCS5D01G516100.1 | Wheat | plastid | 73.27 | 48.37 |
| TraesCS5B01G516000.1 | Wheat | plastid | 73.27 | 48.05 |
| VIT_13s0147g00110.t01 | Wine grape | plastid | 74.26 | 44.64 |
| VIT_06s0080g00410.t01 | Wine grape | plastid | 79.21 | 44.44 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 61.39 | 43.36 |
| TraesCS5B01G517300.1 | Wheat | plastid | 60.4 | 40.4 |
| TraesCS4A01G355200.1 | Wheat | plastid | 60.4 | 37.65 |
| TraesCS4A01G356200.1 | Wheat | mitochondrion, plastid | 74.26 | 35.71 |
| HORVU5Hr1G117910.3 | Barley | plastid | 72.28 | 31.33 |
| GSMUA_Achr11P... | Banana | plastid | 77.23 | 29.55 |
| GSMUA_Achr5P18450_001 | Banana | plastid | 31.68 | 21.33 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 31.68 | 14.48 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr11G18910_001 | EnsemblPlants:GSMUA_Achr11P18910_001 | EnsemblPlants:GSMUA_Achr11T18910_001 | InterPro:IPR001041 | InterPro:IPR012675 |
| UniProt:M0RTH1 | PFAM:PF00111 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 |
| TIGRFAMs:TIGR02008 | UniParc:UPI0002960036 | : | : | : | : |
Description
Ferredoxin-3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G18910_001]
Coordinates
chr11:-:20184382..20184687
Molecular Weight (calculated)
10861.6 Da
IEP (calculated)
4.060
GRAVY (calculated)
-0.232
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVYKVKKLI GPEGQEHELD AADDTYILDA AETAGVELPY SCRAGACYTC AGLTVSGTGN VDQSDGSFLD DSQMAEGYVL TCISYPRSDC IIHTHKEGDL
101: Y
101: Y
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.