Factsheet for Os03t0835900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93144	Sorghum	plastid	84.97	86.09
Zm00001d034760_P001	Maize	mitochondrion, plastid	83.66	84.21
GSMUA_Achr11P...	Banana	cytosol	52.29	79.21
TraesCS1B01G416500.1	Wheat	cytosol	45.75	72.16
Solyc11g068430.1.1	Tomato	nucleus	58.17	71.77
TraesCS5D01G516100.1	Wheat	plastid	71.24	71.24
TraesCS5B01G516000.1	Wheat	plastid	70.59	70.13
Os07t0251500-00	Rice	cytosol	45.75	70.0
PGSC0003DMT400015058	Potato	plastid	66.01	66.89
PGSC0003DMT400067774	Potato	plastid	61.44	62.67
KRH25235	Soybean	plastid	60.78	61.59
Os05t0443500-01	Rice	plastid	58.82	60.81
KRH30423	Soybean	plastid	60.78	60.0
VIT_13s0147g00110.t01	Wine grape	plastid	61.44	55.95
Os04t0412200-01	Rice	plastid	53.59	53.95
TraesCS5B01G517300.1	Wheat	plastid	52.94	53.64
VIT_06s0080g00410.t01	Wine grape	plastid	62.09	52.78
TraesCS4A01G356200.1	Wheat	mitochondrion, plastid	70.59	51.43
TraesCS4A01G355200.1	Wheat	plastid	52.94	50.0
Os08t0104600-02	Rice	extracellular	44.44	48.92
Os01t0860601-01	Rice	plastid	52.29	48.48
HORVU5Hr1G117910.3	Barley	plastid	69.93	45.92
Os03t0659200-01	Rice	plastid	28.1	29.25
Os03t0685000-01	Rice	plastid	27.45	22.95

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	EntrezGene:4334701
ProteinID:AAR88570.1	ProteinID:ABF99753.1	EMBL:AK121063	ProteinID:BAF13735.1	ProteinID:BAS87252.1	InterPro:Beta-grasp_dom_sf
ProteinID:EAZ29208.1	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0022900	GO:GO:0046872
GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlantsGene:Os03g0835900
EnsemblPlants:Os03t0835900-01	PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF4
UniProt:Q75LK5	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0000232A6A	RefSeq:XP_015629765.1	SEG:seg

Description

ferredoxin 3Similar to Ferredoxin III, chloroplast precursor (Fd III). (Os03t0835900-01)

Coordinates

chr3:+:35122475..35124341

Molecular Weight (calculated)

16209.9 Da

IEP (calculated)

4.493

GRAVY (calculated)

-0.172

Length

153 amino acids

Sequence
(BLAST)

001: MATCTLATSC VSLSNARTQA SKVAAVKSPA SLSFFSQGMQ FPSLKASSKK LDVSAMATYK VKLITPEGQE HEFEAPDDTY ILDAAETAGV ELPYSCRAGA
101: CSTCAGKIEA GSVDQSDGSF LDDAQQEEGY VLTCVSYPKS DCVIHTHKEG DLY

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.