Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G355200.1 | Wheat | plastid | 95.36 | 88.89 |
| GSMUA_Achr11P... | Banana | cytosol | 40.4 | 60.4 |
| EER93144 | Sorghum | plastid | 55.63 | 55.63 |
| Zm00001d034760_P001 | Maize | mitochondrion, plastid | 55.63 | 55.26 |
| Solyc11g068430.1.1 | Tomato | nucleus | 45.03 | 54.84 |
| Os03t0835900-01 | Rice | plastid | 53.64 | 52.94 |
| TraesCS5B01G516000.1 | Wheat | plastid | 53.64 | 52.6 |
| TraesCS1B01G416500.1 | Wheat | cytosol | 33.11 | 51.55 |
| PGSC0003DMT400015058 | Potato | plastid | 48.34 | 48.34 |
| PGSC0003DMT400067774 | Potato | plastid | 46.36 | 46.67 |
| KRH25235 | Soybean | plastid | 45.7 | 45.7 |
| KRH30423 | Soybean | plastid | 46.36 | 45.16 |
| TraesCS1B01G285500.1 | Wheat | plastid | 43.71 | 43.71 |
| TraesCS3B01G406100.1 | Wheat | plastid | 43.71 | 42.86 |
| TraesCS2B01G311100.1 | Wheat | plastid | 42.38 | 42.67 |
| VIT_13s0147g00110.t01 | Wine grape | plastid | 47.02 | 42.26 |
| VIT_06s0080g00410.t01 | Wine grape | plastid | 48.34 | 40.56 |
| TraesCS7B01G226100.1 | Wheat | plastid | 37.75 | 39.86 |
| TraesCS7B01G226200.1 | Wheat | plastid | 37.09 | 39.44 |
| TraesCS4B01G015800.1 | Wheat | plastid | 23.84 | 25.35 |
| TraesCS4B01G028100.1 | Wheat | plastid | 25.17 | 20.43 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | GO:GO:0051537 | InterPro:IPR001041 |
| InterPro:IPR012675 | PFAM:PF00111 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 |
| TIGRFAMs:TIGR02008 | EnsemblPlantsGene:TraesCS5B01G517300 | EnsemblPlants:TraesCS5B01G517300.1 | TIGR:cd00207 | : | : |
Description
No Description!
Coordinates
chr5B:-:680821957..680822445
Molecular Weight (calculated)
16085.2 Da
IEP (calculated)
6.980
GRAVY (calculated)
-0.007
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSTFATSA RALQHIISTA AATSPRRPSS LGFAGRVPSV LIRSSRCKLD VSAAAVYMLK LVTPGGREYE LEAPDDAYIL DTAESAGVEL PCACRAGACY
101: KCAGKVEAGT VHRADGSLLH GRLQEEGYVL ICVSCPRSDC VIHTHKEDDL W
101: KCAGKVEAGT VHRADGSLLH GRLQEEGYVL ICVSCPRSDC VIHTHKEDDL W
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.