Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G292400.1 | Wheat | plastid | 96.67 | 96.67 |
| HORVU2Hr1G072880.1 | Barley | plastid | 96.0 | 95.36 |
| Os04t0412200-01 | Rice | plastid | 73.33 | 72.37 |
| Zm00001d003797_P001 | Maize | plastid | 73.33 | 70.97 |
| EES10739 | Sorghum | plastid | 73.33 | 70.51 |
| Zm00001d025352_P001 | Maize | plastid | 68.0 | 66.23 |
| TraesCS1B01G416500.1 | Wheat | cytosol | 37.33 | 57.73 |
| TraesCS5B01G516000.1 | Wheat | plastid | 53.33 | 51.95 |
| TraesCS7B01G226200.1 | Wheat | plastid | 48.67 | 51.41 |
| TraesCS3B01G406100.1 | Wheat | plastid | 52.0 | 50.65 |
| CDY04500 | Canola | plastid | 49.33 | 48.68 |
| Bra012013.1-P | Field mustard | plastid | 49.33 | 48.68 |
| CDX71446 | Canola | plastid | 49.33 | 48.68 |
| Bra034355.1-P | Field mustard | plastid | 47.33 | 48.63 |
| TraesCS7B01G226100.1 | Wheat | plastid | 46.0 | 48.25 |
| TraesCS1B01G285500.1 | Wheat | plastid | 48.0 | 47.68 |
| CDY31182 | Canola | plastid | 48.67 | 47.4 |
| CDX83271 | Canola | plastid | 48.0 | 46.75 |
| Bra000507.1-P | Field mustard | plastid | 48.0 | 46.75 |
| CDY30545 | Canola | plastid | 47.33 | 45.81 |
| AT2G27510.1 | Thale cress | plastid | 47.33 | 45.81 |
| CDX77119 | Canola | plastid | 46.67 | 44.87 |
| TraesCS5B01G517300.1 | Wheat | plastid | 42.67 | 42.38 |
| TraesCS4B01G015800.1 | Wheat | plastid | 27.33 | 28.87 |
| TraesCS4B01G028100.1 | Wheat | plastid | 26.67 | 21.51 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf |
| InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | GO:GO:0051537 | InterPro:IPR001041 |
| InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF2 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | EnsemblPlantsGene:TraesCS2B01G311100 | EnsemblPlants:TraesCS2B01G311100.1 | TIGR:cd00207 | : |
Description
No Description!
Coordinates
chr2B:+:445172492..445172944
Molecular Weight (calculated)
16077.9 Da
IEP (calculated)
5.604
GRAVY (calculated)
-0.181
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTFAAPIL CNLRANPRLN HSTRQQPRHL HLSSARMAPT LTGSRARSDF RAAAVYKVKL IGPEGKESVI EVAEDSYILD AAEEAGVELP YSCRAGACST
101: CAGKVLEGGV DQSDQSFLDD AQVSAGYALT CVAYPTSDLV IQTHKESDLY
101: CAGKVLEGGV DQSDQSFLDD AQVSAGYALT CVAYPTSDLV IQTHKESDLY
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.