Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30545 | Canola | plastid | 99.32 | 93.55 |
| CDX77119 | Canola | plastid | 97.26 | 91.03 |
| Bra000507.1-P | Field mustard | plastid | 86.99 | 82.47 |
| AT2G27510.1 | Thale cress | plastid | 86.99 | 81.94 |
| Bra012013.1-P | Field mustard | plastid | 82.88 | 79.61 |
| Bra009066.1-P | Field mustard | cytosol | 39.04 | 58.16 |
| Bra027109.1-P | Field mustard | plastid | 48.63 | 47.97 |
| HORVU2Hr1G072880.1 | Barley | plastid | 49.32 | 47.68 |
| TraesCS2D01G292400.1 | Wheat | plastid | 48.63 | 47.33 |
| TraesCS2B01G311100.1 | Wheat | plastid | 48.63 | 47.33 |
| Bra031471.1-P | Field mustard | plastid | 47.95 | 47.3 |
| Bra018415.1-P | Field mustard | plastid | 46.58 | 45.95 |
| Os04t0412200-01 | Rice | plastid | 46.58 | 44.74 |
| Zm00001d003797_P001 | Maize | plastid | 45.89 | 43.23 |
| EES10739 | Sorghum | plastid | 45.89 | 42.95 |
| Zm00001d025352_P001 | Maize | plastid | 44.52 | 42.21 |
| Bra040469.1-P | Field mustard | plastid | 44.52 | 37.36 |
| Bra036911.1-P | Field mustard | plastid | 32.19 | 31.13 |
| Bra035490.1-P | Field mustard | plastid | 24.66 | 20.11 |
| Bra023277.1-P | Field mustard | plastid | 23.97 | 19.55 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf |
| EnsemblPlantsGene:Bra034355 | EnsemblPlants:Bra034355.1 | EnsemblPlants:Bra034355.1-P | InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 | GO:GO:0055114 | InterPro:IPR001041 |
| InterPro:IPR012675 | UniProt:M4EZW2 | PFAM:PF00111 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 |
| PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0002543A72 | SEG:seg | : |
Description
AT2G27510 (E=4e-063) ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding
Coordinates
chrA04:-:12082736..12083176
Molecular Weight (calculated)
15778.6 Da
IEP (calculated)
4.965
GRAVY (calculated)
-0.235
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTKAVLRSQ PTNKLIANKS QQVSVGSVKK VSRSFGLKCS ANSGATMMSA VYKVKLIGPE GEEHEFEVQD DQFILDAAEE AGVDLPYSCR AGACSTCAGQ
101: IVKGQVDQSE GSFLEDDHLE KGFVLTCVAY PQSDCVIHTH KETELF
101: IVKGQVDQSE GSFLEDDHLE KGFVLTCVAY PQSDCVIHTH KETELF
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.