Factsheet for Bra000507.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83271	Canola	plastid	100.0	100.0
Bra012013.1-P	Field mustard	plastid	86.36	87.5
Bra034355.1-P	Field mustard	plastid	82.47	86.99
AT2G27510.1	Thale cress	plastid	87.01	86.45
Bra009066.1-P	Field mustard	cytosol	35.06	55.1
Os04t0412200-01	Rice	plastid	48.7	49.34
Bra018415.1-P	Field mustard	plastid	46.75	48.65
HORVU2Hr1G072880.1	Barley	plastid	47.4	48.34
TraesCS2D01G292400.1	Wheat	plastid	46.75	48.0
TraesCS2B01G311100.1	Wheat	plastid	46.75	48.0
Bra027109.1-P	Field mustard	plastid	46.1	47.97
Bra031471.1-P	Field mustard	plastid	45.45	47.3
Zm00001d003797_P001	Maize	plastid	47.4	47.1
EES10739	Sorghum	plastid	47.4	46.79
Zm00001d025352_P001	Maize	plastid	46.75	46.75
Bra040469.1-P	Field mustard	plastid	42.86	37.93
Bra036911.1-P	Field mustard	plastid	31.82	32.45
Bra035490.1-P	Field mustard	plastid	24.68	21.23
Bra023277.1-P	Field mustard	plastid	24.03	20.67

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:Beta-grasp_dom_sf
EnsemblPlantsGene:Bra000507	EnsemblPlants:Bra000507.1	EnsemblPlants:Bra000507.1-P	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041
InterPro:IPR012675	UniProt:M4C8H9	PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112
PANTHER:PTHR43112:SF4	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0002540026	:	:

Description

AT2G27510 (E=1e-072) ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding

Coordinates

chrA03:+:11485794..11486258

Molecular Weight (calculated)

16699.5 Da

IEP (calculated)

5.206

GRAVY (calculated)

-0.412

Length

154 amino acids

Sequence
(BLAST)

001: MATVRVSSTS MTKAVRRSQP TNKLTTNKSQ HVSVGSVNKV SRSFGLKCSA YSGATMSAVY KVKLIGPDGQ ENEFDVQDDQ YILDAAEEAG VDLPYSCRAG
101: ACSTCAGNIE RGQVDQSDGS FLEDDHMEKG YVLTCVAYPQ SDCVIHTHKE TELF

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.