Factsheet for Bra012013.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04500	Canola	plastid	99.34	99.34
Bra000507.1-P	Field mustard	plastid	87.5	86.36
AT2G27510.1	Thale cress	plastid	84.87	83.23
Bra034355.1-P	Field mustard	plastid	79.61	82.88
Bra009066.1-P	Field mustard	cytosol	35.53	55.1
Bra018415.1-P	Field mustard	plastid	49.34	50.68
HORVU2Hr1G072880.1	Barley	plastid	50.0	50.33
Os04t0412200-01	Rice	plastid	50.0	50.0
Zm00001d025352_P001	Maize	plastid	50.0	49.35
TraesCS2B01G311100.1	Wheat	plastid	48.68	49.33
TraesCS2D01G292400.1	Wheat	plastid	48.68	49.33
Bra027109.1-P	Field mustard	plastid	48.03	49.32
Bra031471.1-P	Field mustard	plastid	47.37	48.65
Zm00001d003797_P001	Maize	plastid	49.34	48.39
EES10739	Sorghum	plastid	48.68	47.44
Bra040469.1-P	Field mustard	plastid	44.08	38.51
Bra036911.1-P	Field mustard	plastid	34.21	34.44
Bra035490.1-P	Field mustard	plastid	26.32	22.35
Bra023277.1-P	Field mustard	plastid	26.32	22.35

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:Beta-grasp_dom_sf
EnsemblPlantsGene:Bra012013	EnsemblPlants:Bra012013.1	EnsemblPlants:Bra012013.1-P	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041
InterPro:IPR012675	UniProt:M4D6A4	PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112
PANTHER:PTHR43112:SF4	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0002541929	:	:

Description

AT2G27510 (E=7e-068) ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding

Coordinates

chrA07:-:10605663..10606121

Molecular Weight (calculated)

16399.2 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.334

Length

152 amino acids

Sequence
(BLAST)

001: MATVQVSSTS MTTKALLRSQ PTNRPITNKL SVGSVNKLSR SFGLKCSANS GATMSAVYKV KLIGPDGQEN EFEVPDDQYI LDAAEEAGVD LPYSCRAGAC
101: STCAGKIEKG QVDQGDGSFL EDHHFEKGYV LTCVAYPQSD CVIHTHKEEE LF

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.