Factsheet for Bra023277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93825	Canola	plastid	100.0	100.0
Bra035490.1-P	Field mustard	plastid	89.39	89.39
CDY71732	Canola	cytosol	56.98	82.93
AT1G32550.2	Thale cress	plastid	88.83	81.96
GSMUA_Achr5P18450_001	Banana	plastid	62.01	74.0
VIT_02s0012g00980.t01	Wine grape	plastid	70.95	67.55
Solyc08g077050.2.1	Tomato	plastid	72.07	67.54
PGSC0003DMT400045201	Potato	plastid	72.07	67.54
KRH58205	Soybean	mitochondrion, plastid	66.48	66.48
KRH04332	Soybean	mitochondrion, plastid	66.48	66.48
Os03t0685000-01	Rice	plastid	66.48	65.03
EER93655	Sorghum	plastid	65.36	62.57
TraesCS4A01G286700.1	Wheat	plastid	63.69	61.96
TraesCS4D01G025700.1	Wheat	plastid	63.13	61.41
TraesCS4B01G028100.1	Wheat	plastid	63.69	61.29
Zm00001d013534_P002	Maize	plastid	64.25	59.9
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	65.36	52.94
Bra009066.1-P	Field mustard	cytosol	18.44	33.67
Bra018415.1-P	Field mustard	plastid	24.58	29.73
Bra031471.1-P	Field mustard	plastid	22.91	27.7
Bra027109.1-P	Field mustard	plastid	22.91	27.7
Bra036911.1-P	Field mustard	plastid	22.35	26.49
Bra012013.1-P	Field mustard	plastid	22.35	26.32
HORVU4Hr1G004210.8	Barley	cytosol	30.73	25.0
Bra000507.1-P	Field mustard	plastid	20.67	24.03
Bra034355.1-P	Field mustard	plastid	19.55	23.97
Bra040469.1-P	Field mustard	plastid	21.79	22.41

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	InterPro:Beta-grasp_dom_sf	EnsemblPlantsGene:Bra023277
EnsemblPlants:Bra023277.1	EnsemblPlants:Bra023277.1-P	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0022900
GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675
UniProt:M4E3C6	PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF10	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	UniParc:UPI0002542274	:	:	:	:

Description

AT1G32550 (E=2e-093) | ferredoxin family protein

Coordinates

chrA09:+:20013085..20014890

Molecular Weight (calculated)

20228.9 Da

IEP (calculated)

5.931

GRAVY (calculated)

-0.367

Length

179 amino acids

Sequence
(BLAST)

001: MALVFHCTSC TWLQRKTFPI NRRYSTNIRR GATTCEYRIP VEISSPADRG ALAVPSHKVT VHDRQRGVVH EFEVPEDQYI LHSAESQNIN LPFACRHGCC
101: TSCAVRVKSG DLRQPQALGI SAELKSQGYA LLCVGFPTSD LEVETQDEDE VYWLQFGRYF ARGPIERDDY ALELAMGDE

Best Arabidopsis Sequence Match ( AT1G32550.1 )
(BLAST)

001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Arabidopsis Description

FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.