Factsheet for TraesCS4D01G025700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G286700.1	Wheat	plastid	96.74	96.74
TraesCS4B01G028100.1	Wheat	plastid	97.28	96.24
EER93655	Sorghum	plastid	80.43	79.14
Os03t0685000-01	Rice	plastid	75.0	75.41
Zm00001d013534_P002	Maize	plastid	78.26	75.0
GSMUA_Achr5P18450_001	Banana	plastid	58.15	71.33
CDY71732	Canola	cytosol	47.28	70.73
KRH58205	Soybean	mitochondrion, plastid	62.5	64.25
CDY66059	Canola	plastid	61.96	63.69
Bra035490.1-P	Field mustard	plastid	61.96	63.69
CDX93825	Canola	plastid	61.41	63.13
KRH04332	Soybean	mitochondrion, plastid	61.41	63.13
CDX84071	Canola	plastid	61.41	63.13
Bra023277.1-P	Field mustard	plastid	61.41	63.13
Solyc08g077050.2.1	Tomato	plastid	64.67	62.3
PGSC0003DMT400045201	Potato	plastid	64.13	61.78
VIT_02s0012g00980.t01	Wine grape	plastid	63.04	61.7
AT1G32550.2	Thale cress	plastid	60.33	57.22
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	63.59	52.94
TraesCS7D01G322100.1	Wheat	plastid	24.46	31.91
TraesCS7D01G322000.1	Wheat	plastid	23.91	30.77
HORVU4Hr1G004210.8	Barley	cytosol	35.87	30.0
TraesCS5D01G516100.1	Wheat	plastid	22.83	27.45
TraesCS3D01G366600.1	Wheat	plastid	21.74	25.97
TraesCS2D01G292400.1	Wheat	plastid	20.65	25.33
TraesCS4D01G014200.1	Wheat	plastid	20.65	25.33
TraesCS1D01G275800.2	Wheat	plastid	21.74	15.21

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	InterPro:Beta-grasp_dom_sf	InterPro:Fd_pln
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	GO:GO:0051537	InterPro:IPR001041
InterPro:IPR012675	PFAM:PF00111	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF10	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	EnsemblPlantsGene:TraesCS4D01G025700	EnsemblPlants:TraesCS4D01G025700.1	TIGR:cd00207	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:11079197..11081580

Molecular Weight (calculated)

19943.5 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.263

Length

184 amino acids

Sequence
(BLAST)

001: MAACPAATTA RVGAAHGGGL WRRSGRSPSL LARLARGTST TARASELQQA PAPAPAAVVP THKVTVHDRE RGVVHHFLVP QDQYILHTAE AQDITLPFAC
101: RHGCCTSCAV RIKSGQIRQP EALGISADLR EQGYALLCVG YPSSDLEVET QDEDEVYWLQ FGRYFARGPV DRDDYALELA MGDE

Best Arabidopsis Sequence Match ( AT1G32550.1 )
(BLAST)

001: MALILPCTFC TSLQKKNFPI NRRYITNFRR GATTATCEFR IPVEVSTPSD RGSLVVPSHK VTVHDRQRGV VHEFEVPEDQ YILHSAESQN ISLPFACRHG
101: CCTSCAVRVK SGELRQPQAL GISAELKSQG YALLCVGFPT SDLEVETQDE DEVYWLQFGR YFARGPIERD DYALELAMGD E

Arabidopsis Description

FdC12Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.