Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G072880.1 | Barley | plastid | 98.0 | 97.35 |
| TraesCS2B01G311100.1 | Wheat | plastid | 96.67 | 96.67 |
| Os04t0412200-01 | Rice | plastid | 73.33 | 72.37 |
| EES10739 | Sorghum | plastid | 73.33 | 70.51 |
| Zm00001d003797_P001 | Maize | plastid | 72.0 | 69.68 |
| Zm00001d025352_P001 | Maize | plastid | 68.0 | 66.23 |
| TraesCS7D01G322100.1 | Wheat | plastid | 48.67 | 51.77 |
| TraesCS3D01G366600.1 | Wheat | plastid | 52.67 | 51.3 |
| TraesCS5D01G516100.1 | Wheat | plastid | 52.0 | 50.98 |
| CDX71446 | Canola | plastid | 50.0 | 49.34 |
| TraesCS7D01G322000.1 | Wheat | plastid | 46.67 | 48.95 |
| CDY04500 | Canola | plastid | 49.33 | 48.68 |
| Bra012013.1-P | Field mustard | plastid | 49.33 | 48.68 |
| Bra034355.1-P | Field mustard | plastid | 47.33 | 48.63 |
| CDY31182 | Canola | plastid | 48.67 | 47.4 |
| CDX83271 | Canola | plastid | 48.0 | 46.75 |
| Bra000507.1-P | Field mustard | plastid | 48.0 | 46.75 |
| CDY30545 | Canola | plastid | 47.33 | 45.81 |
| AT2G27510.1 | Thale cress | plastid | 47.33 | 45.81 |
| CDX77119 | Canola | plastid | 46.67 | 44.87 |
| TraesCS4D01G014200.1 | Wheat | plastid | 28.67 | 28.67 |
| TraesCS1D01G275800.2 | Wheat | plastid | 49.33 | 28.14 |
| TraesCS4D01G025700.1 | Wheat | plastid | 25.33 | 20.65 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf |
| InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | GO:GO:0051537 | InterPro:IPR001041 |
| InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF2 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | EnsemblPlantsGene:TraesCS2D01G292400 | EnsemblPlants:TraesCS2D01G292400.1 | TIGR:cd00207 | : |
Description
No Description!
Coordinates
chr2D:+:375027019..375027471
Molecular Weight (calculated)
16136.0 Da
IEP (calculated)
5.199
GRAVY (calculated)
-0.230
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTFTAPIL CNLRANPRLN HSTRQQPRHL HLSSARMAPT LTGSRTRNDF RAAAVYKVKL IGPEGKESVI EVAEDSYILD AAEEAGVELP YSCRAGACST
101: CAGKVLEGGV DQSDQSFLDD AQVGAGYALT CVAYPTSDLV IETHKESDLY
101: CAGKVLEGGV DQSDQSFLDD AQVGAGYALT CVAYPTSDLV IETHKESDLY
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.