Factsheet for Bra027109.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013653.1-P
Bra019349.1-P
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60950.1	Bra013653.1-P	AT4G22890.1	18243102
AT1G60950.1	Bra019349.1-P	AT4G22890.1	18243102
AT1G60950.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031471.1-P	Field mustard	plastid	96.62	96.62
CDY46194	Canola	plastid	96.62	96.62
AT1G60950.1	Thale cress	plastid	89.86	89.86
Bra018415.1-P	Field mustard	plastid	85.14	85.14
Bra040469.1-P	Field mustard	plastid	90.54	77.01
GSMUA_Achr5P01200_001	Banana	plastid	67.57	69.93
VIT_12s0035g00270.t01	Wine grape	plastid	65.54	68.31
Solyc10g075160.1.1	Tomato	plastid	64.86	66.67
KRH26360	Soybean	nucleus, plastid	64.19	64.63
Solyc10g044520.1.1	Tomato	plastid	62.16	63.89
PGSC0003DMT400031198	Potato	cytosol, extracellular, plastid	60.81	62.5
TraesCS7B01G226200.1	Wheat	plastid	59.46	61.97
TraesCS7A01G325500.1	Wheat	plastid	59.46	61.97
PGSC0003DMT400011522	Potato	plastid	56.76	61.76
HORVU7Hr1G077750.1	Barley	plastid	58.78	61.7
TraesCS7D01G322100.1	Wheat	plastid	58.78	61.7
Zm00001d035002_P001	Maize	plastid	57.43	61.59
Solyc01g103920.2.1	Tomato	plastid	57.43	60.71
EES13199	Sorghum	plastid	58.11	60.14
EES13198	Sorghum	plastid	58.11	59.72
Zm00001d035003_P001	Maize	plastid	56.08	59.29
TraesCS7D01G322000.1	Wheat	plastid	56.76	58.74
HORVU7Hr1G077740.1	Barley	plastid	56.76	58.74
TraesCS7A01G325400.1	Wheat	plastid	56.76	58.74
TraesCS7B01G226100.1	Wheat	plastid	56.76	58.74
KXG24178	Sorghum	plastid	58.78	57.62
Os08t0104600-02	Rice	extracellular	53.38	56.83
Zm00001d035001_P001	Maize	plastid	56.08	55.33
PGSC0003DMT400087715	Potato	cytosol, plastid	37.84	53.85
Zm00001d049732_P001	Maize	plastid	52.7	50.32
Bra009066.1-P	Field mustard	cytosol	33.11	50.0
Bra034355.1-P	Field mustard	plastid	47.97	48.63
Bra012013.1-P	Field mustard	plastid	49.32	48.03
Bra000507.1-P	Field mustard	plastid	47.97	46.1
Bra036911.1-P	Field mustard	plastid	30.41	29.8
Bra035490.1-P	Field mustard	plastid	28.38	23.46
Bra023277.1-P	Field mustard	plastid	27.7	22.91

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:Beta-grasp_dom_sf
EnsemblPlantsGene:Bra027109	EnsemblPlants:Bra027109.1	EnsemblPlants:Bra027109.1-P	InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041
InterPro:IPR012675	UniProt:M4EE98	PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112
PANTHER:PTHR43112:SF4	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0001CAB7FE	SEG:seg	:

Description

AT1G60950 (E=1e-055) FED A, ATFD2 | FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding

Coordinates

chrA09:-:8531430..8531876

Molecular Weight (calculated)

15700.3 Da

IEP (calculated)

4.122

GRAVY (calculated)

0.006

Length

148 amino acids

Sequence
(BLAST)

001: MASTAISSVI VGTSFLRRQT SPISLRSLPL ANTQTLFGLK SGTARGGRVT AMATYKVKFI TPEGEQEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGFVDQ SDQSFLDDDQ IAAGFVLTCA AYPTSDVTIE THREDDIV

Best Arabidopsis Sequence Match ( AT1G60950.1 )
(BLAST)

001: MASTALSSAI VGTSFIRRSP APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGELEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV

Arabidopsis Description

FD2Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178W2W5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.