Factsheet for TraesCS3B01G406100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G366600.1	Wheat	plastid	94.16	94.16
HORVU3Hr1G084210.1	Barley	plastid	86.36	89.26
TraesCS3A01G373900.1	Wheat	mitochondrion	74.03	80.28
Solyc05g055280.1.1	Tomato	cytosol	46.1	72.45
Zm00001d012293_P001	Maize	plastid	66.23	68.92
EES01793	Sorghum	plastid	69.48	64.85
Os01t0860601-01	Rice	plastid	66.88	62.42
Solyc11g006910.1.1	Tomato	mitochondrion, plastid	48.05	59.2
Bra009066.1-P	Field mustard	cytosol	37.01	58.16
TraesCS1B01G285500.1	Wheat	plastid	53.9	54.97
TraesCS1B01G416500.1	Wheat	cytosol	33.77	53.61
PGSC0003DMT400060121	Potato	plastid	51.3	52.67
TraesCS7B01G226100.1	Wheat	plastid	48.7	52.45
TraesCS2B01G311100.1	Wheat	plastid	50.65	52.0
PGSC0003DMT400061612	Potato	plastid	50.0	51.33
TraesCS5B01G516000.1	Wheat	plastid	50.65	50.65
TraesCS7B01G226200.1	Wheat	plastid	45.45	49.3
Solyc04g009710.1.1	Tomato	plastid	44.16	44.16
TraesCS5B01G517300.1	Wheat	plastid	42.86	43.71
CDY21622	Canola	plastid	40.26	41.61
CDX69869	Canola	plastid	38.96	40.54
AT5G10000.1	Thale cress	plastid	37.66	39.19
TraesCS4B01G015800.1	Wheat	plastid	29.87	32.39
TraesCS4B01G028100.1	Wheat	plastid	27.27	22.58

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:Beta-grasp_dom_sf
InterPro:Fd_pln	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	GO:GO:0051537
InterPro:IPR001041	InterPro:IPR012675	PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112
PANTHER:PTHR43112:SF7	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	EnsemblPlantsGene:TraesCS3B01G406100	EnsemblPlants:TraesCS3B01G406100.1	TIGR:cd00207
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:641666585..641667049

Molecular Weight (calculated)

16020.9 Da

IEP (calculated)

4.664

GRAVY (calculated)

-0.058

Length

154 amino acids

Sequence
(BLAST)

001: MATLGAATAC VPASGVRCIP TFAAAPAPIR TAPRPTASLK RPTTGGVRLS ARFRTAAATH KVKLVGPDGE ETELEVAEDA YILDAAEEAG VELPYSCRAG
101: SCSTCAGKLA SGEVDQSDGS FLDDAQMAEG YVLTCVAYPR ADCVIYTHKE EEVH

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.