CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30423	Soybean	plastid	92.72	90.32
Solyc11g068430.1.1	Tomato	nucleus	63.58	77.42
GSMUA_Achr5P00940_001	Banana	cytosol	49.67	76.53
GSMUA_Achr11P...	Banana	cytosol	50.33	75.25
PGSC0003DMT400015058	Potato	plastid	68.21	68.21
KRH36019	Soybean	plastid	68.87	67.53
KRH44081	Soybean	cytosol	44.37	66.34
KRG90740	Soybean	plastid	67.55	66.23
PGSC0003DMT400067774	Potato	plastid	65.56	66.0
Zm00001d034760_P001	Maize	mitochondrion, plastid	64.9	64.47
EER93144	Sorghum	plastid	64.24	64.24
Os07t0251500-00	Rice	cytosol	41.06	62.0
TraesCS1B01G416500.1	Wheat	cytosol	39.07	60.82
Os03t0835900-01	Rice	plastid	61.59	60.78
TraesCS5D01G516100.1	Wheat	plastid	58.28	57.52
TraesCS5B01G516000.1	Wheat	plastid	57.62	56.49
KRH26361	Soybean	nucleus	52.32	53.74
KRH59154	Soybean	nucleus, plastid	50.99	52.38
KRH43040	Soybean	nucleus, plastid	49.67	52.08
KRH26360	Soybean	nucleus, plastid	50.33	51.7
TraesCS5B01G517300.1	Wheat	plastid	45.7	45.7
KRH26359	Soybean	mitochondrion, plastid	50.99	44.25
TraesCS4A01G355200.1	Wheat	plastid	45.7	42.59
TraesCS4A01G356200.1	Wheat	mitochondrion, plastid	57.62	41.43
HORVU5Hr1G117910.3	Barley	plastid	58.28	37.77
GSMUA_Achr11P...	Banana	plastid	59.6	34.09
KRH77855	Soybean	plastid	27.81	28.57
KRH27637	Soybean	mitochondrion, plastid	27.15	27.89
KRH58205	Soybean	mitochondrion, plastid	22.52	18.99
KRH04332	Soybean	mitochondrion, plastid	22.52	18.99

Protein Annotations

MapMan:1.1.5.1	EntrezGene:100499711	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30
EMBL:ACUP02007225	EMBL:BT089266	InterPro:Beta-grasp_dom_sf	UniProt:C6SVS3	InterPro:Fd_pln	EnsemblPlantsGene:GLYMA_12G089200
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537
GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlants:KRH25235	ProteinID:KRH25235	ProteinID:KRH25235.1
PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF4	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	UniParc:UPI0001B1583B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:7333337..7335967

Molecular Weight (calculated)

15939.7 Da

IEP (calculated)

4.703

GRAVY (calculated)

-0.077

Length

151 amino acids

Sequence
(BLAST)

001: MATLSTNHCT LQTASKNPSI VATIVKCPSS LRSVKSVSRS FGLKSASSFR VTAMASYKVK LIGPDGTENE FEATDDTYIL DAAESAGVEL PYSCRAGACS
101: TCAGKIVSGS VDQSDGSFLD DNQLKEGFVL TCVSYPTADC VIETHKEGDL Y

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.