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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 10
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:cytosol, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:cytosol, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH59154 Soybean nucleus, plastid 93.75 91.84
VIT_12s0035g00270.t01 Wine grape plastid 70.83 71.83
KRH44081 Soybean cytosol 48.61 69.31
KRH26361 Soybean nucleus 70.14 68.71
PGSC0003DMT400011522 Potato plastid 64.58 68.38
Solyc01g103920.2.1 Tomato plastid 65.97 67.86
KRH26360 Soybean nucleus, plastid 68.06 66.67
Solyc10g044520.1.1 Tomato plastid 65.97 65.97
GSMUA_Achr5P01200_001 Banana plastid 62.5 62.94
Solyc10g075160.1.1 Tomato plastid 61.11 61.11
PGSC0003DMT400031198 Potato cytosol, extracellular, plastid 61.11 61.11
Zm00001d035002_P001 Maize plastid 55.56 57.97
PGSC0003DMT400087715 Potato cytosol, plastid 41.67 57.69
HORVU7Hr1G077750.1 Barley plastid 56.25 57.45
TraesCS7D01G322100.1 Wheat plastid 55.56 56.74
HORVU7Hr1G077740.1 Barley plastid 56.25 56.64
TraesCS7D01G322000.1 Wheat plastid 56.25 56.64
TraesCS7B01G226100.1 Wheat plastid 56.25 56.64
TraesCS7A01G325400.1 Wheat plastid 56.25 56.64
TraesCS7B01G226200.1 Wheat plastid 55.56 56.34
TraesCS7A01G325500.1 Wheat plastid 55.56 56.34
EES13199 Sorghum plastid 55.56 55.94
KRH26359 Soybean mitochondrion, plastid 65.97 54.6
EES13198 Sorghum plastid 54.17 54.17
Os08t0104600-02 Rice extracellular 50.69 52.52
Zm00001d035003_P001 Maize plastid 50.69 52.14
KXG24178 Sorghum plastid 54.17 51.66
Zm00001d035001_P001 Maize plastid 53.47 51.33
KRH25235 Soybean plastid 52.08 49.67
KRH30423 Soybean plastid 52.78 49.03
KRG90740 Soybean plastid 50.69 47.4
KRH36019 Soybean plastid 50.0 46.75
Zm00001d049732_P001 Maize plastid 47.92 44.52
KRH27637 Soybean mitochondrion, plastid 30.56 29.93
KRH77855 Soybean plastid 29.86 29.25
KRH58205 Soybean mitochondrion, plastid 28.47 22.91
KRH04332 Soybean mitochondrion, plastid 28.47 22.91
Protein Annotations
MapMan:1.1.5.1EntrezGene:100305932InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeGene3D:3.10.20.30EMBL:ACUP02004843
EMBL:BT089775InterPro:Beta-grasp_dom_sfUniProt:C6SX81InterPro:Fd_plnEnsemblPlantsGene:GLYMA_08G126800GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0022900GO:GO:0046872GO:GO:0051536GO:GO:0051537GO:GO:0055114
InterPro:IPR001041InterPro:IPR012675EnsemblPlants:KRH43040ProteinID:KRH43040ProteinID:KRH43040.1PFAM:PF00111
PFscan:PS51085PANTHER:PTHR43112PANTHER:PTHR43112:SF4SUPFAM:SSF54292TIGRFAMs:TIGR02008UniParc:UPI0001B15215
Description
hypothetical protein
Coordinates
chr8:-:9770037..9771122
Molecular Weight (calculated)
15522.5 Da
IEP (calculated)
4.388
GRAVY (calculated)
-0.104
Length
144 amino acids
Sequence
(BLAST)
001: MATTAALSGT MVSTSFMRKQ PMTTKSLKTF PNALFGLKGG RGGRVTCMAS YKVKLITPEG EVEFECPDDV FIVDKAEEEG IELPYSCRAG SCVSCVGKIV
101: KGDVDQSDGS FLDDEQIESG WVLTCVALPR SDVVIETHKD GEIE
Best Arabidopsis Sequence Match ( AT1G60950.1 )
(BLAST)
001: MASTALSSAI VGTSFIRRSP APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGELEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV
Arabidopsis Description
FD2Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178W2W5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.