CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26361	Soybean	nucleus	77.23	53.06
GSMUA_Achr5P01200_001	Banana	plastid	73.27	51.75
TraesCS7D01G322100.1	Wheat	plastid	70.3	50.35
HORVU7Hr1G077750.1	Barley	plastid	70.3	50.35
TraesCS7B01G226200.1	Wheat	plastid	70.3	50.0
TraesCS7A01G325500.1	Wheat	plastid	70.3	50.0
KRH26360	Soybean	nucleus, plastid	72.28	49.66
EES13199	Sorghum	plastid	69.31	48.95
TraesCS7D01G322000.1	Wheat	plastid	69.31	48.95
TraesCS7B01G226100.1	Wheat	plastid	69.31	48.95
TraesCS7A01G325400.1	Wheat	plastid	69.31	48.95
HORVU7Hr1G077740.1	Barley	plastid	69.31	48.95
KRH43040	Soybean	nucleus, plastid	69.31	48.61
Zm00001d035002_P001	Maize	plastid	66.34	48.55
KRH26359	Soybean	mitochondrion, plastid	82.18	47.7
KRH59154	Soybean	nucleus, plastid	69.31	47.62
Zm00001d035001_P001	Maize	plastid	69.31	46.67
Os08t0104600-02	Rice	extracellular	63.37	46.04
KXG24178	Sorghum	plastid	68.32	45.7
EES13198	Sorghum	plastid	64.36	45.14
KRH25235	Soybean	plastid	66.34	44.37
Zm00001d035003_P001	Maize	plastid	61.39	44.29
KRH30423	Soybean	plastid	66.34	43.23
KRH36019	Soybean	plastid	62.38	40.91
KRG90740	Soybean	plastid	62.38	40.91
Zm00001d049732_P001	Maize	plastid	58.42	38.06
KRH27637	Soybean	mitochondrion, plastid	38.61	26.53
KRH77855	Soybean	plastid	37.62	25.85
KRH04332	Soybean	mitochondrion, plastid	34.65	19.55
KRH58205	Soybean	mitochondrion, plastid	33.66	18.99

Protein Annotations

MapMan:1.1.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	UniProt:A0A0R0IP95
EMBL:ACUP02004908	InterPro:Beta-grasp_dom_sf	InterPro:Fd_pln	EnsemblPlantsGene:GLYMA_08G188500	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:IPR001041
InterPro:IPR012675	EnsemblPlants:KRH44081	ProteinID:KRH44081	ProteinID:KRH44081.1	PFAM:PF00111	ScanProsite:PS00197
PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF4	SUPFAM:SSF54292	TIGRFAMs:TIGR02008	UniParc:UPI0006ED5BA0

Description

hypothetical protein

Coordinates

chr8:+:15120223..15120530

Molecular Weight (calculated)

11248.1 Da

IEP (calculated)

4.043

GRAVY (calculated)

-0.292

Length

101 amino acids

Sequence
(BLAST)

001: RTWRRVTAMA SYKVKLITPE GEQEFECPDD VCILDQAEEK GLELPYSCRA GSCSVCAGKV EQSDGNFLDD DQIVAGFVLT RVAYPTSDVV VETHWEEELT
101: A

Best Arabidopsis Sequence Match ( AT1G60950.1 )
(BLAST)

001: MASTALSSAI VGTSFIRRSP APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGELEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV

Arabidopsis Description

FD2Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178W2W5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.