CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25235	Soybean	plastid	90.32	92.72
Solyc11g068430.1.1	Tomato	nucleus	62.58	78.23
GSMUA_Achr5P00940_001	Banana	cytosol	47.74	75.51
GSMUA_Achr11P...	Banana	cytosol	48.39	74.26
PGSC0003DMT400015058	Potato	plastid	68.39	70.2
PGSC0003DMT400067774	Potato	plastid	65.81	68.0
KRH44081	Soybean	cytosol	43.23	66.34
KRH36019	Soybean	plastid	65.81	66.23
KRG90740	Soybean	plastid	63.87	64.29
Os07t0251500-00	Rice	cytosol	40.0	62.0
Zm00001d034760_P001	Maize	mitochondrion, plastid	60.0	61.18
EER93144	Sorghum	plastid	59.35	60.93
TraesCS1B01G416500.1	Wheat	cytosol	38.06	60.82
Os03t0835900-01	Rice	plastid	60.0	60.78
TraesCS5D01G516100.1	Wheat	plastid	56.13	56.86
TraesCS5B01G516000.1	Wheat	plastid	55.48	55.84
KRH26361	Soybean	nucleus	50.32	53.06
KRH59154	Soybean	nucleus, plastid	50.32	53.06
KRH43040	Soybean	nucleus, plastid	49.03	52.78
KRH26360	Soybean	nucleus, plastid	47.1	49.66
TraesCS5B01G517300.1	Wheat	plastid	45.16	46.36
KRH26359	Soybean	mitochondrion, plastid	49.68	44.25
TraesCS4A01G355200.1	Wheat	plastid	43.87	41.98
TraesCS4A01G356200.1	Wheat	mitochondrion, plastid	56.13	41.43
HORVU5Hr1G117910.3	Barley	plastid	56.77	37.77
GSMUA_Achr11P...	Banana	plastid	56.77	33.33
KRH77855	Soybean	plastid	27.1	28.57
KRH27637	Soybean	mitochondrion, plastid	26.45	27.89
KRH58205	Soybean	mitochondrion, plastid	21.94	18.99
KRH04332	Soybean	mitochondrion, plastid	21.94	18.99

Protein Annotations

MapMan:1.1.5.1	EntrezGene:100785611	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30
EMBL:ACUP02007007	EMBL:BT099480	InterPro:Beta-grasp_dom_sf	UniProt:C6TNZ4	InterPro:Fd_pln	EnsemblPlantsGene:GLYMA_11G183300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537
GO:GO:0055114	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlants:KRH30423	ProteinID:KRH30423	ProteinID:KRH30423.1
PFAM:PF00111	ScanProsite:PS00197	PFscan:PS51085	PANTHER:PTHR43112	PANTHER:PTHR43112:SF4	SUPFAM:SSF54292
TIGRFAMs:TIGR02008	UniParc:UPI0001B17172	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:25084751..25086370

Molecular Weight (calculated)

16357.2 Da

IEP (calculated)

4.703

GRAVY (calculated)

-0.089

Length

155 amino acids

Sequence
(BLAST)

001: MATLSTVKVS PHCMFQTASK NPSTVATTMK CPSSFGSVKS ISRSFGLKSS SSFRVTAMAS YKVKLIGPDG TENEFEATDD TYILDAAESA GVELPYSCRA
101: GACSTCAGKI VAGSVDQSDG SFLDDNQLKE GFVLTCVSYP TADCVIETHK EGDLY

Best Arabidopsis Sequence Match ( AT2G27510.1 )
(BLAST)

001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF

Arabidopsis Description

FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.