Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G516000.1 | Wheat | plastid | 59.66 | 90.26 |
| TraesCS5D01G516100.1 | Wheat | plastid | 58.37 | 88.89 |
| TraesCS4A01G356200.1 | Wheat | mitochondrion, plastid | 66.52 | 73.81 |
| GSMUA_Achr11P... | Banana | cytosol | 31.33 | 72.28 |
| Zm00001d034760_P001 | Maize | mitochondrion, plastid | 46.35 | 71.05 |
| EER93144 | Sorghum | plastid | 45.92 | 70.86 |
| Os03t0835900-01 | Rice | plastid | 45.92 | 69.93 |
| Solyc11g068430.1.1 | Tomato | nucleus | 36.48 | 68.55 |
| PGSC0003DMT400015058 | Potato | plastid | 39.91 | 61.59 |
| PGSC0003DMT400067774 | Potato | plastid | 38.2 | 59.33 |
| KRH25235 | Soybean | plastid | 37.77 | 58.28 |
| KRH30423 | Soybean | plastid | 37.77 | 56.77 |
| VIT_13s0147g00110.t01 | Wine grape | plastid | 39.91 | 55.36 |
| HORVU2Hr1G072880.1 | Barley | plastid | 33.91 | 52.32 |
| HORVU7Hr1G077740.1 | Barley | plastid | 31.76 | 51.75 |
| VIT_06s0080g00410.t01 | Wine grape | plastid | 39.48 | 51.11 |
| HORVU3Hr1G084210.1 | Barley | plastid | 32.62 | 51.01 |
| HORVU7Hr1G077750.1 | Barley | plastid | 29.61 | 48.94 |
| HORVU4Hr1G002520.1 | Barley | plastid | 18.03 | 28.38 |
| HORVU4Hr1G004210.8 | Barley | cytosol | 12.88 | 13.64 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | UniProt:A0A287SWB6 |
| InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 |
| GO:GO:0051536 | GO:GO:0051537 | GO:GO:0055114 | EnsemblPlantsGene:HORVU5Hr1G117910 | EnsemblPlants:HORVU5Hr1G117910.3 | InterPro:IPR001041 |
| InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI000B47F385 | SEG:seg | : | : |
Description
Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A287SWB6]
Coordinates
chrchr5H:-:651486914..651489772
Molecular Weight (calculated)
24708.7 Da
IEP (calculated)
4.861
GRAVY (calculated)
-0.492
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: PVRSLTAAVP VLAEETTGAA RARALAIPPI KRWPPPPPTP TTPSDTENTR KEHEEEEARE PARRPPPSFL ADPPRQSGFK MSTSTFATSC ALLGNVGTTG
101: ASQKAVKSSL SFLGRGAPQL PSLRSSSSKK LDVSAAATYK VKLVDQDGQE HEFEAPDDAY ILDSAETAGV ELPYSCRAGA CSTCAGKIEA GSVDQSDGSF
201: LDDAQQEEGY VLTCVAYPKS DCVIHTHKEG DLY
101: ASQKAVKSSL SFLGRGAPQL PSLRSSSSKK LDVSAAATYK VKLVDQDGQE HEFEAPDDAY ILDSAETAGV ELPYSCRAGA CSTCAGKIEA GSVDQSDGSF
201: LDDAQQEEGY VLTCVAYPKS DCVIHTHKEG DLY
001: MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
101: GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK ETELF
Arabidopsis Description
FD3Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.