Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 60.87 | 41.58 |
| GSMUA_Achr5P00940_001 | Banana | cytosol | 57.97 | 40.82 |
| TraesCS7D01G322100.1 | Wheat | plastid | 82.61 | 40.43 |
| HORVU7Hr1G077750.1 | Barley | plastid | 82.61 | 40.43 |
| TraesCS7B01G226200.1 | Wheat | plastid | 82.61 | 40.14 |
| TraesCS7A01G325500.1 | Wheat | plastid | 82.61 | 40.14 |
| TraesCS7D01G322000.1 | Wheat | plastid | 78.26 | 37.76 |
| TraesCS7B01G226100.1 | Wheat | plastid | 78.26 | 37.76 |
| HORVU7Hr1G077740.1 | Barley | plastid | 78.26 | 37.76 |
| TraesCS7A01G325400.1 | Wheat | plastid | 78.26 | 37.76 |
| Os08t0104600-02 | Rice | extracellular | 73.91 | 36.69 |
| EES13199 | Sorghum | plastid | 73.91 | 35.66 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 72.46 | 34.97 |
| Zm00001d035002_P001 | Maize | plastid | 69.57 | 34.78 |
| EES13198 | Sorghum | plastid | 72.46 | 34.72 |
| Zm00001d035001_P001 | Maize | plastid | 75.36 | 34.67 |
| KXG24178 | Sorghum | plastid | 73.91 | 33.77 |
| Zm00001d035003_P001 | Maize | plastid | 66.67 | 32.86 |
| Zm00001d049732_P001 | Maize | plastid | 63.77 | 28.39 |
| GSMUA_Achr5P18450_001 | Banana | plastid | 39.13 | 18.0 |
| GSMUA_Achr11P... | Banana | plastid | 63.77 | 16.67 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 39.13 | 12.22 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | Gene3D:3.10.20.30 | InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr8G32490_001 | EnsemblPlants:GSMUA_Achr8P32490_001 | EnsemblPlants:GSMUA_Achr8T32490_001 | InterPro:IPR001041 | InterPro:IPR012675 |
| UniProt:M0TVK1 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0002948F1F |
Description
Ferredoxin, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G32490_001]
Coordinates
chr8:-:33865223..33865432
Molecular Weight (calculated)
7569.7 Da
IEP (calculated)
3.631
GRAVY (calculated)
-0.345
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MYILDQAEEE GISLPYSSRA GEIVQGQLDQ SDASFLDDDQ ITAGYVLTCA AYPKSDLVIE THKEEELTG
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Arabidopsis Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.