Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20591 | Canola | plastid | 92.57 | 92.57 |
| Bra018415.1-P | Field mustard | plastid | 91.89 | 91.89 |
| CDY20975 | Canola | plastid | 91.89 | 91.89 |
| AT1G60950.1 | Thale cress | plastid | 87.16 | 87.16 |
| CDX97925 | Canola | plastid | 83.11 | 83.11 |
| CDY19334 | Canola | plastid | 76.35 | 81.3 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 69.59 | 72.54 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 66.22 | 68.53 |
| Solyc10g075160.1.1 | Tomato | plastid | 64.19 | 65.97 |
| PGSC0003DMT400011522 | Potato | plastid | 59.46 | 64.71 |
| Solyc01g103920.2.1 | Tomato | plastid | 60.14 | 63.57 |
| KRH26360 | Soybean | nucleus, plastid | 62.16 | 62.59 |
| Solyc10g044520.1.1 | Tomato | plastid | 60.81 | 62.5 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 60.14 | 61.81 |
| TraesCS7B01G226200.1 | Wheat | plastid | 58.11 | 60.56 |
| TraesCS7A01G325500.1 | Wheat | plastid | 58.11 | 60.56 |
| TraesCS7D01G322100.1 | Wheat | plastid | 57.43 | 60.28 |
| HORVU7Hr1G077750.1 | Barley | plastid | 57.43 | 60.28 |
| TraesCS7D01G322000.1 | Wheat | plastid | 58.11 | 60.14 |
| HORVU7Hr1G077740.1 | Barley | plastid | 58.11 | 60.14 |
| TraesCS7A01G325400.1 | Wheat | plastid | 58.11 | 60.14 |
| TraesCS7B01G226100.1 | Wheat | plastid | 58.11 | 60.14 |
| Zm00001d035002_P001 | Maize | plastid | 55.41 | 59.42 |
| EES13198 | Sorghum | plastid | 56.76 | 58.33 |
| Zm00001d035003_P001 | Maize | plastid | 53.38 | 56.43 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 39.19 | 55.77 |
| EES13199 | Sorghum | plastid | 53.38 | 55.24 |
| Os08t0104600-02 | Rice | extracellular | 51.35 | 54.68 |
| KXG24178 | Sorghum | plastid | 54.73 | 53.64 |
| Zm00001d035001_P001 | Maize | plastid | 54.05 | 53.33 |
| Zm00001d049732_P001 | Maize | plastid | 53.38 | 50.97 |
| AT2G27510.1 | Thale cress | plastid | 50.0 | 47.74 |
| AT5G10000.1 | Thale cress | plastid | 37.84 | 37.84 |
| AT4G14890.1 | Thale cress | plastid | 31.08 | 29.87 |
| AT1G32550.2 | Thale cress | plastid | 29.73 | 22.68 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | EntrezGene:837639 |
| UniProt:A0A178WLN7 | ProteinID:AAB65481.1 | ProteinID:AEE28669.1 | ArrayExpress:AT1G10960 | EnsemblPlantsGene:AT1G10960 | RefSeq:AT1G10960 |
| TAIR:AT1G10960 | RefSeq:AT1G10960-TAIR-G | EnsemblPlants:AT1G10960.1 | TAIR:AT1G10960.1 | Symbol:ATFD1 | EMBL:AY058106 |
| EMBL:AY086012 | EMBL:AY127948 | InterPro:Beta-grasp_dom_sf | InterPro:Fd_pln | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | GO:GO:0080167 | InterPro:IPR001041 | InterPro:IPR012675 | RefSeq:NP_172565.1 | UniProt:O04090 |
| ProteinID:OAP18831.1 | PFAM:PF00111 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0000001407 | SEG:seg | : | : |
Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
Coordinates
chr1:+:3664187..3665040
Molecular Weight (calculated)
15897.6 Da
IEP (calculated)
4.168
GRAVY (calculated)
-0.098
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.