Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10960.1 | CDY24170 | AT3G47620.1 | 21798944 |
| AT1G10960.1 | CDY36943 | AT3G47620.1 | 21798944 |
| AT1G10960.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT1G10960.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018415.1-P | Field mustard | plastid | 96.62 | 96.62 |
| CDY20591 | Canola | plastid | 94.59 | 94.59 |
| AT1G10960.1 | Thale cress | plastid | 91.89 | 91.89 |
| CDY46194 | Canola | plastid | 86.49 | 86.49 |
| CDY03773 | Canola | plastid | 85.81 | 85.81 |
| CDY44833 | Canola | plastid | 85.14 | 85.14 |
| CDY54581 | Canola | plastid | 84.46 | 84.46 |
| CDY54579 | Canola | plastid | 84.46 | 84.46 |
| CDY12877 | Canola | plastid | 84.46 | 84.46 |
| CDY33318 | Canola | plastid | 79.73 | 79.73 |
| CDY19334 | Canola | plastid | 73.65 | 78.42 |
| CDX97925 | Canola | plastid | 78.38 | 78.38 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 66.89 | 69.72 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 66.22 | 68.53 |
| Solyc10g075160.1.1 | Tomato | plastid | 64.86 | 66.67 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 61.49 | 63.19 |
| PGSC0003DMT400011522 | Potato | plastid | 57.43 | 62.5 |
| Solyc10g044520.1.1 | Tomato | plastid | 60.14 | 61.81 |
| Solyc01g103920.2.1 | Tomato | plastid | 58.11 | 61.43 |
| TraesCS7B01G226200.1 | Wheat | plastid | 58.11 | 60.56 |
| TraesCS7A01G325500.1 | Wheat | plastid | 58.11 | 60.56 |
| KRH26360 | Soybean | nucleus, plastid | 60.14 | 60.54 |
| HORVU7Hr1G077750.1 | Barley | plastid | 57.43 | 60.28 |
| TraesCS7D01G322100.1 | Wheat | plastid | 57.43 | 60.28 |
| TraesCS7D01G322000.1 | Wheat | plastid | 58.11 | 60.14 |
| TraesCS7A01G325400.1 | Wheat | plastid | 58.11 | 60.14 |
| HORVU7Hr1G077740.1 | Barley | plastid | 58.11 | 60.14 |
| TraesCS7B01G226100.1 | Wheat | plastid | 58.11 | 60.14 |
| Zm00001d035002_P001 | Maize | plastid | 54.05 | 57.97 |
| EES13198 | Sorghum | plastid | 56.08 | 57.64 |
| Zm00001d035003_P001 | Maize | plastid | 52.7 | 55.71 |
| Os08t0104600-02 | Rice | extracellular | 52.03 | 55.4 |
| EES13199 | Sorghum | plastid | 53.38 | 55.24 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 37.84 | 53.85 |
| KXG24178 | Sorghum | plastid | 54.05 | 52.98 |
| Zm00001d035001_P001 | Maize | plastid | 53.38 | 52.67 |
| Zm00001d049732_P001 | Maize | plastid | 52.03 | 49.68 |
| CDY04500 | Canola | plastid | 50.68 | 49.34 |
| CDY31182 | Canola | plastid | 50.0 | 48.05 |
| CDX71446 | Canola | plastid | 49.32 | 48.03 |
| CDX83271 | Canola | plastid | 48.65 | 46.75 |
| CDY30545 | Canola | plastid | 48.65 | 46.45 |
| CDX77119 | Canola | plastid | 47.97 | 45.51 |
| CDX69869 | Canola | plastid | 35.14 | 35.14 |
| CDY21622 | Canola | plastid | 34.46 | 34.23 |
| CDY29779 | Canola | plastid | 29.73 | 30.56 |
| CDY42796 | Canola | plastid | 29.73 | 29.14 |
| CDY71732 | Canola | cytosol | 21.62 | 26.02 |
| CDY66059 | Canola | plastid | 31.08 | 25.7 |
| CDX84071 | Canola | plastid | 31.08 | 25.7 |
| CDX93825 | Canola | plastid | 30.41 | 25.14 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | GO:A0A078G3B3 |
| UniProt:A0A078G3B3 | InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY20975 | ProteinID:CDY20975 | ProteinID:CDY20975.1 | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00015124001 | InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 |
| PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0004EE241E |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g25500DFerredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078G3B3]
Coordinates
chrLK032115:+:153815..154453
Molecular Weight (calculated)
15984.7 Da
IEP (calculated)
4.150
GRAVY (calculated)
-0.072
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTAFSSAI VNTSFLRRQQ TPLSLRSLPV ANTQSLFGLR SSTARGGRVT CMATYKVKFI TPEGEQEVEC EDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGFIDQ TDQSFLDDDQ MSEGYVLTCV AYPTSDVVIE THKEEAIV
101: GKVVSGFIDQ TDQSFLDDDQ MSEGYVLTCV AYPTSDVVIE THKEEAIV
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Arabidopsis Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.