Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54579 | Canola | plastid | 95.27 | 95.27 |
| CDY54581 | Canola | plastid | 94.59 | 94.59 |
| CDY03773 | Canola | plastid | 93.24 | 93.24 |
| CDY44833 | Canola | plastid | 92.57 | 92.57 |
| CDY46194 | Canola | plastid | 91.22 | 91.22 |
| CDY12877 | Canola | plastid | 89.86 | 89.86 |
| AT1G60950.1 | Thale cress | plastid | 89.19 | 89.19 |
| CDY20591 | Canola | plastid | 83.11 | 83.11 |
| Bra040469.1-P | Field mustard | plastid | 96.62 | 82.18 |
| CDY20975 | Canola | plastid | 79.73 | 79.73 |
| CDX97925 | Canola | plastid | 76.35 | 76.35 |
| CDY19334 | Canola | plastid | 71.62 | 76.26 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 66.22 | 68.53 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 62.84 | 65.49 |
| Solyc10g075160.1.1 | Tomato | plastid | 61.49 | 63.19 |
| KRH26360 | Soybean | nucleus, plastid | 60.14 | 60.54 |
| Solyc10g044520.1.1 | Tomato | plastid | 58.11 | 59.72 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 56.76 | 58.33 |
| PGSC0003DMT400011522 | Potato | plastid | 53.38 | 58.09 |
| Zm00001d035002_P001 | Maize | plastid | 54.05 | 57.97 |
| Solyc01g103920.2.1 | Tomato | plastid | 54.05 | 57.14 |
| TraesCS7B01G226200.1 | Wheat | plastid | 53.38 | 55.63 |
| TraesCS7A01G325500.1 | Wheat | plastid | 53.38 | 55.63 |
| TraesCS7D01G322100.1 | Wheat | plastid | 52.7 | 55.32 |
| HORVU7Hr1G077750.1 | Barley | plastid | 52.7 | 55.32 |
| Zm00001d035003_P001 | Maize | plastid | 52.03 | 55.0 |
| EES13198 | Sorghum | plastid | 52.7 | 54.17 |
| TraesCS7A01G325400.1 | Wheat | plastid | 52.03 | 53.85 |
| HORVU7Hr1G077740.1 | Barley | plastid | 52.03 | 53.85 |
| EES13199 | Sorghum | plastid | 52.03 | 53.85 |
| TraesCS7B01G226100.1 | Wheat | plastid | 52.03 | 53.85 |
| TraesCS7D01G322000.1 | Wheat | plastid | 52.03 | 53.85 |
| Os08t0104600-02 | Rice | extracellular | 49.32 | 52.52 |
| Zm00001d035001_P001 | Maize | plastid | 52.7 | 52.0 |
| KXG24178 | Sorghum | plastid | 52.7 | 51.66 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 35.14 | 50.0 |
| Zm00001d049732_P001 | Maize | plastid | 50.68 | 48.39 |
| CDY04500 | Canola | plastid | 44.59 | 43.42 |
| CDX71446 | Canola | plastid | 44.59 | 43.42 |
| CDY30545 | Canola | plastid | 45.27 | 43.23 |
| CDY31182 | Canola | plastid | 44.59 | 42.86 |
| CDX77119 | Canola | plastid | 44.59 | 42.31 |
| CDX83271 | Canola | plastid | 43.92 | 42.21 |
| CDX69869 | Canola | plastid | 34.46 | 34.46 |
| CDY21622 | Canola | plastid | 33.78 | 33.56 |
| CDY29779 | Canola | plastid | 29.73 | 30.56 |
| CDY42796 | Canola | plastid | 29.73 | 29.14 |
| CDY71732 | Canola | cytosol | 18.24 | 21.95 |
| CDY66059 | Canola | plastid | 26.35 | 21.79 |
| CDX84071 | Canola | plastid | 26.35 | 21.79 |
| CDX93825 | Canola | plastid | 25.68 | 21.23 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | GO:A0A078H8Z0 |
| UniProt:A0A078H8Z0 | InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY33318 | ProteinID:CDY33318 | ProteinID:CDY33318.1 | InterPro:Fd_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00054122001 | InterPro:IPR001041 | InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 |
| PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 | SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0004EDCB05 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng04290DFerredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078H8Z0]
Coordinates
chrLK032311:-:183223..183913
Molecular Weight (calculated)
15800.3 Da
IEP (calculated)
4.004
GRAVY (calculated)
-0.009
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTALSSAI VGTSFIRRQT APISLRSLPL ANTQSLFGLK SGTTHGGRVI AMATYKVQFI TPEGEQEVEC DDDVYVLDAA EEAGIDLPYS CHAGSCSSCA
101: GKFVSGSVDQ SDQSFLDDDQ IAEGFFLTCA AYPTFDVTIE THREDDIV
101: GKFVSGSVDQ SDQSFLDDDQ IAEGFFLTCA AYPTFDVTIE THREDDIV
001: MASTALSSAI VSTSFLRRQQ TPISLRSLPF ANTQSLFGLK SSTARGGRVT AMATYKVKFI TPEGEQEVEC EEDVYVLDAA EEAGLDLPYS CRAGSCSSCA
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
101: GKVVSGSIDQ SDQSFLDDEQ MSEGYVLTCV AYPTSDVVIE THKEEAIM
Arabidopsis Description
FD1Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.