Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54581 | Canola | plastid | 98.65 | 98.65 |
| CDY54579 | Canola | plastid | 97.97 | 97.97 |
| CDY46194 | Canola | plastid | 97.97 | 97.97 |
| CDY44833 | Canola | plastid | 97.97 | 97.97 |
| CDY12877 | Canola | plastid | 95.27 | 95.27 |
| AT1G60950.1 | Thale cress | plastid | 94.59 | 94.59 |
| CDY33318 | Canola | plastid | 93.24 | 93.24 |
| CDY20591 | Canola | plastid | 88.51 | 88.51 |
| CDY20975 | Canola | plastid | 85.81 | 85.81 |
| CDY19334 | Canola | plastid | 76.35 | 81.3 |
| CDX97925 | Canola | plastid | 81.08 | 81.08 |
| GSMUA_Achr5P01200_001 | Banana | plastid | 69.59 | 72.03 |
| VIT_12s0035g00270.t01 | Wine grape | plastid | 66.89 | 69.72 |
| Solyc10g075160.1.1 | Tomato | plastid | 66.89 | 68.75 |
| KRH26360 | Soybean | nucleus, plastid | 64.19 | 64.63 |
| Solyc10g044520.1.1 | Tomato | plastid | 62.84 | 64.58 |
| PGSC0003DMT400031198 | Potato | cytosol, extracellular, plastid | 62.16 | 63.89 |
| PGSC0003DMT400011522 | Potato | plastid | 57.43 | 62.5 |
| Zm00001d035002_P001 | Maize | plastid | 57.43 | 61.59 |
| Solyc01g103920.2.1 | Tomato | plastid | 58.11 | 61.43 |
| TraesCS7A01G325500.1 | Wheat | plastid | 58.78 | 61.27 |
| TraesCS7B01G226200.1 | Wheat | plastid | 58.78 | 61.27 |
| TraesCS7D01G322100.1 | Wheat | plastid | 58.11 | 60.99 |
| HORVU7Hr1G077750.1 | Barley | plastid | 58.11 | 60.99 |
| Zm00001d035003_P001 | Maize | plastid | 56.76 | 60.0 |
| EES13198 | Sorghum | plastid | 58.11 | 59.72 |
| EES13199 | Sorghum | plastid | 57.43 | 59.44 |
| TraesCS7B01G226100.1 | Wheat | plastid | 56.08 | 58.04 |
| HORVU7Hr1G077740.1 | Barley | plastid | 56.08 | 58.04 |
| TraesCS7D01G322000.1 | Wheat | plastid | 56.08 | 58.04 |
| TraesCS7A01G325400.1 | Wheat | plastid | 56.08 | 58.04 |
| KXG24178 | Sorghum | plastid | 58.11 | 56.95 |
| Os08t0104600-02 | Rice | extracellular | 52.7 | 56.12 |
| Zm00001d035001_P001 | Maize | plastid | 56.08 | 55.33 |
| PGSC0003DMT400087715 | Potato | cytosol, plastid | 37.84 | 53.85 |
| Zm00001d049732_P001 | Maize | plastid | 54.73 | 52.26 |
| CDY04500 | Canola | plastid | 48.65 | 47.37 |
| CDX71446 | Canola | plastid | 48.65 | 47.37 |
| CDY30545 | Canola | plastid | 49.32 | 47.1 |
| CDY31182 | Canola | plastid | 48.65 | 46.75 |
| CDX77119 | Canola | plastid | 48.65 | 46.15 |
| CDX83271 | Canola | plastid | 47.3 | 45.45 |
| CDX69869 | Canola | plastid | 36.49 | 36.49 |
| CDY21622 | Canola | plastid | 35.81 | 35.57 |
| CDY29779 | Canola | plastid | 30.41 | 31.25 |
| CDY42796 | Canola | plastid | 30.41 | 29.8 |
| CDY71732 | Canola | cytosol | 20.27 | 24.39 |
| CDY66059 | Canola | plastid | 28.38 | 23.46 |
| CDX84071 | Canola | plastid | 28.38 | 23.46 |
| CDX93825 | Canola | plastid | 27.7 | 22.91 |
Protein Annotations
| MapMan:1.1.5.1 | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | GO:A0A078EW28 |
| InterPro:Beta-grasp_dom_sf | EnsemblPlants:CDY03773 | ProteinID:CDY03773 | ProteinID:CDY03773.1 | InterPro:Fd_pln | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | GO:GO:0051537 | EnsemblPlantsGene:GSBRNA2T00117151001 | InterPro:IPR001041 |
| InterPro:IPR012675 | PFAM:PF00111 | ScanProsite:PS00197 | PFscan:PS51085 | PANTHER:PTHR43112 | PANTHER:PTHR43112:SF4 |
| SUPFAM:SSF54292 | TIGRFAMs:TIGR02008 | UniParc:UPI0004EACBCE | SEG:seg | : | : |
Description
BnaC01g28900D
Coordinates
chrLK031946:+:123753..124690
Molecular Weight (calculated)
15614.1 Da
IEP (calculated)
4.082
GRAVY (calculated)
-0.089
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTALSSAI VGTSFLRRQT APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGEQEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDDQ IAEGFVLTCA AYPTSDVTIE THREDDIV
101: GKVVSGSVDQ SDQSFLDDDQ IAEGFVLTCA AYPTSDVTIE THREDDIV
001: MASTALSSAI VGTSFIRRSP APISLRSLPS ANTQSLFGLK SGTARGGRVT AMATYKVKFI TPEGELEVEC DDDVYVLDAA EEAGIDLPYS CRAGSCSSCA
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV
101: GKVVSGSVDQ SDQSFLDDEQ IGEGFVLTCA AYPTSDVTIE THKEEDIV
Arabidopsis Description
FD2Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178W2W5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.