Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24170 | Canola | nucleus | 95.77 | 74.49 |
| CDX78335 | Canola | nucleus | 35.45 | 38.07 |
| Bra018126.1-P | Field mustard | nucleus | 93.65 | 37.98 |
| CDY40752 | Canola | cytosol | 35.45 | 37.85 |
| CDX81094 | Canola | nucleus | 35.45 | 37.22 |
| GSMUA_Achr6P02720_001 | Banana | nucleus | 50.26 | 35.19 |
| AT3G47620.1 | Thale cress | nucleus | 88.89 | 34.36 |
| GSMUA_Achr4P00500_001 | Banana | nucleus | 48.15 | 33.46 |
| GSMUA_Achr7P20990_001 | Banana | nucleus | 46.56 | 32.84 |
| CDX87179 | Canola | nucleus | 37.04 | 32.56 |
| CDY16842 | Canola | nucleus | 37.04 | 32.56 |
| CDY46951 | Canola | nucleus | 37.04 | 30.43 |
| CDY44770 | Canola | cytosol | 35.45 | 29.78 |
| CDY40799 | Canola | nucleus | 35.45 | 29.13 |
| CDY68276 | Canola | nucleus, plastid | 48.68 | 28.66 |
| CDY01754 | Canola | nucleus, plastid | 48.68 | 28.48 |
| CDY28576 | Canola | nucleus | 47.62 | 28.3 |
| VIT_17s0000g06020.t01 | Wine grape | nucleus | 55.03 | 28.26 |
| CDY60249 | Canola | cytosol | 30.69 | 27.88 |
| CDY45760 | Canola | nucleus | 35.45 | 27.69 |
| CDY21536 | Canola | nucleus | 34.39 | 27.54 |
| CDX88010 | Canola | nucleus | 36.51 | 27.27 |
| CDY20065 | Canola | cytosol | 37.57 | 26.39 |
| KRH63357 | Soybean | nucleus | 55.56 | 26.38 |
| CDY28577 | Canola | cytosol | 33.86 | 26.34 |
| KRH54542 | Soybean | nucleus | 56.61 | 26.23 |
| Solyc03g116320.2.1 | Tomato | nucleus | 56.08 | 25.92 |
| CDY48964 | Canola | nucleus | 30.16 | 25.91 |
| CDY00171 | Canola | nucleus | 37.57 | 25.72 |
| PGSC0003DMT400001613 | Potato | nucleus | 56.08 | 25.6 |
| GSMUA_Achr7P17990_001 | Banana | nucleus | 44.97 | 25.3 |
| KRH03466 | Soybean | nucleus | 52.91 | 24.21 |
| Zm00001d044836_P001 | Maize | nucleus | 45.5 | 24.09 |
| CDY52403 | Canola | nucleus | 38.62 | 23.93 |
| KRH56919 | Soybean | nucleus | 52.38 | 23.8 |
| Os06t0226700-01 | Rice | nucleus | 48.15 | 23.51 |
| CDY13675 | Canola | nucleus | 38.62 | 23.47 |
| CDX95656 | Canola | nucleus | 35.98 | 23.21 |
| EER88112 | Sorghum | nucleus | 47.62 | 22.84 |
| Zm00001d037221_P001 | Maize | cytosol, nucleus, peroxisome | 45.5 | 22.69 |
| Zm00001d052256_P001 | Maize | cytosol, nucleus, peroxisome | 46.56 | 22.62 |
| EES07255 | Sorghum | nucleus | 47.62 | 22.61 |
| Zm00001d018045_P001 | Maize | cytosol, nucleus, peroxisome | 47.62 | 22.5 |
| TraesCS7B01G091900.1 | Wheat | cytosol, nucleus, peroxisome | 43.92 | 22.31 |
| Os02t0747400-01 | Rice | nucleus | 48.15 | 22.2 |
| HORVU6Hr1G075650.1 | Barley | nucleus | 46.56 | 21.89 |
| CDY53888 | Canola | nucleus | 35.98 | 21.86 |
| CDY27099 | Canola | nucleus | 32.28 | 21.86 |
| CDX72856 | Canola | nucleus | 38.62 | 21.86 |
| CDX96370 | Canola | nucleus | 38.62 | 21.79 |
| TraesCS7D01G187600.1 | Wheat | cytosol | 46.03 | 21.75 |
| TraesCS6B01G334900.1 | Wheat | nucleus | 46.03 | 21.64 |
| TraesCS6A01G306500.1 | Wheat | nucleus | 46.03 | 21.53 |
| HORVU7Hr1G038130.1 | Barley | nucleus | 45.5 | 21.5 |
| TraesCS6D01G285600.1 | Wheat | nucleus | 45.5 | 21.45 |
| CDX74756 | Canola | nucleus | 36.51 | 21.23 |
| CDX91612 | Canola | nucleus | 32.28 | 21.18 |
| CDY18910 | Canola | nucleus | 35.98 | 20.92 |
| CDX82193 | Canola | nucleus, plastid | 38.62 | 20.74 |
| CDY03666 | Canola | nucleus, plastid | 38.62 | 20.56 |
| CDY39914 | Canola | nucleus, plastid | 40.74 | 19.54 |
| CDY71135 | Canola | nucleus | 40.21 | 19.39 |
Protein Annotations
| MapMan:15.5.19 | UniProt:A0A078HJD0 | EnsemblPlants:CDY36943 | ProteinID:CDY36943 | ProteinID:CDY36943.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00063089001 | InterPro:IPR017887 | PFAM:PF03634 | PFscan:PS51369 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF70 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0004EE1D54 | SEG:seg |
Description
BnaA06g17280DBnaA06g17280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJD0]
Coordinates
chrLK032387:-:324871..326652
Molecular Weight (calculated)
20861.3 Da
IEP (calculated)
8.562
GRAVY (calculated)
-1.023
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKPSSTLLN VIMDGGDNLS QTQPQPQQQK PQPQKDLQVT QEETAVVVAK KPPLKRASTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE
101: WLLQQAEPSV IAATGTGTIP ANFTSLNISL RGRSDGGDHH NTQRHHHQQQ QQQHHHHNIL SGLNQYGRQV SGESQASDSL GGGEEDPQD
101: WLLQQAEPSV IAATGTGTIP ANFTSLNISL RGRSDGGDHH NTQRHHHQQQ QQQHHHHNIL SGLNQYGRQV SGESQASDSL GGGEEDPQD
001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
Arabidopsis Description
TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.