Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008782.1-P | Field mustard | cytosol | 63.69 | 79.85 |
| CDX85614 | Canola | cytosol | 61.31 | 75.18 |
| CDX78558 | Canola | cytosol | 60.12 | 73.72 |
| CDX91084 | Canola | cytosol | 60.12 | 73.72 |
| AT5G14070.1 | Thale cress | cytosol | 60.71 | 72.86 |
| CDX70540 | Canola | cytosol | 58.93 | 72.26 |
| CDX74327 | Canola | cytosol | 49.4 | 60.58 |
| CDX91918 | Canola | cytosol | 47.62 | 59.7 |
| CDX69609 | Canola | cytosol | 35.12 | 58.42 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 40.48 | 51.13 |
| KRG94592 | Soybean | plastid | 39.29 | 50.0 |
| Solyc05g015910.1.1 | Tomato | cytosol | 38.69 | 49.62 |
| KRH06898 | Soybean | plastid | 39.29 | 49.25 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 35.12 | 49.17 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 35.12 | 49.17 |
| CDY48890 | Canola | cytosol, plastid | 29.76 | 49.02 |
| EES05136 | Sorghum | cytosol | 37.5 | 48.84 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 34.52 | 48.33 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 34.52 | 48.33 |
| KRH70543 | Soybean | cytosol | 38.1 | 48.12 |
| CDY32430 | Canola | cytosol, plastid | 29.17 | 48.04 |
| PGSC0003DMT400006076 | Potato | plastid | 38.1 | 47.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.9 | 47.69 |
| Os04t0393500-01 | Rice | cytosol | 38.1 | 47.41 |
| GSMUA_Achr10P... | Banana | cytosol | 38.1 | 47.41 |
| PGSC0003DMT400013430 | Potato | cytosol | 36.31 | 46.92 |
| Zm00001d016593_P001 | Maize | cytosol | 36.31 | 46.92 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 37.5 | 46.32 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 36.9 | 46.27 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 35.71 | 46.15 |
| CDY32431 | Canola | cytosol | 27.98 | 46.08 |
| CDY48891 | Canola | cytosol | 27.98 | 46.08 |
| Zm00001d003927_P001 | Maize | cytosol | 37.5 | 45.99 |
| EES10652 | Sorghum | cytosol | 37.5 | 45.99 |
| Os02t0512400-01 | Rice | cytosol | 36.9 | 45.93 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 36.31 | 45.52 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 36.31 | 45.52 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 36.31 | 45.52 |
| CDY19270 | Canola | cytosol, plastid | 27.38 | 45.1 |
| CDY37292 | Canola | cytosol, plastid | 27.38 | 45.1 |
| CDY68328 | Canola | cytosol | 27.38 | 45.1 |
| KRH01571 | Soybean | cytosol | 38.1 | 45.07 |
| CDX70828 | Canola | cytosol | 26.79 | 44.12 |
| CDY02610 | Canola | cytosol | 26.79 | 44.12 |
| CDY54881 | Canola | cytosol | 25.6 | 43.43 |
| CDY13904 | Canola | cytosol | 26.19 | 43.14 |
| CDX92597 | Canola | cytosol | 26.19 | 43.14 |
| CDX88929 | Canola | cytosol | 26.19 | 43.14 |
| CDY66332 | Canola | cytosol | 25.6 | 42.16 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 38.69 | 41.67 |
| CDY09953 | Canola | cytosol | 24.4 | 41.41 |
| CDY06230 | Canola | cytosol | 24.4 | 41.41 |
| CDY10229 | Canola | cytosol | 24.4 | 41.41 |
| CDX95739 | Canola | cytosol | 25.0 | 41.18 |
| CDY09747 | Canola | cytosol | 25.0 | 41.18 |
| CDX90576 | Canola | cytosol | 25.0 | 41.18 |
| CDY54296 | Canola | cytosol | 25.0 | 41.18 |
| CDY53023 | Canola | cytosol | 25.0 | 40.78 |
| CDX89161 | Canola | cytosol | 25.0 | 40.78 |
| CDY23990 | Canola | cytosol | 24.4 | 40.2 |
| CDX80139 | Canola | cytosol | 24.4 | 40.2 |
| CDY52638 | Canola | cytosol | 24.4 | 40.2 |
| CDY53024 | Canola | cytosol | 24.4 | 40.2 |
| CDY66333 | Canola | cytosol | 24.4 | 40.2 |
| CDY29666 | Canola | cytosol | 24.4 | 40.2 |
| CDX97824 | Canola | cytosol | 24.4 | 40.2 |
| CDX76677 | Canola | cytosol | 24.4 | 39.81 |
| CDY11465 | Canola | cytosol | 24.4 | 39.81 |
| CDY11464 | Canola | cytosol | 24.4 | 39.81 |
| CDX80138 | Canola | cytosol | 24.4 | 39.81 |
| CDY25124 | Canola | cytosol | 23.81 | 39.22 |
| CDY10745 | Canola | cytosol | 23.81 | 39.22 |
| CDX84825 | Canola | cytosol | 23.81 | 39.22 |
| CDY55528 | Canola | cytosol | 24.4 | 39.05 |
| CDY09078 | Canola | cytosol, extracellular | 23.21 | 38.61 |
| CDY22745 | Canola | cytosol, extracellular | 23.21 | 38.61 |
| CDY09079 | Canola | cytosol | 23.21 | 38.24 |
| CDY54294 | Canola | cytosol | 23.21 | 38.24 |
| CDY22746 | Canola | cytosol | 23.21 | 38.24 |
| CDY27469 | Canola | cytosol | 23.81 | 38.1 |
| CDY69190 | Canola | cytosol | 23.21 | 37.5 |
| CDX67910 | Canola | cytosol | 22.62 | 37.25 |
| CDX93949 | Canola | cytosol | 22.62 | 37.25 |
| CDX89159 | Canola | cytosol | 22.62 | 37.25 |
| CDY11466 | Canola | cytosol | 22.62 | 37.25 |
| CDX76678 | Canola | cytosol | 22.02 | 36.27 |
| CDY11462 | Canola | cytosol | 22.02 | 36.27 |
| CDX76675 | Canola | cytosol | 22.02 | 36.27 |
| CDY32493 | Canola | cytosol | 22.02 | 36.27 |
| CDY68061 | Canola | cytosol | 22.02 | 36.27 |
| CDX89162 | Canola | cytosol | 22.02 | 36.27 |
| CDY18141 | Canola | cytosol | 21.43 | 35.29 |
| CDX89921 | Canola | cytosol | 20.83 | 34.31 |
| CDY71728 | Canola | cytosol | 22.02 | 26.06 |
| CDX97821 | Canola | mitochondrion | 20.24 | 25.56 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078J674 | UniProt:A0A078J674 | EnsemblPlants:CDY58422 | ProteinID:CDY58422 |
| ProteinID:CDY58422.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00023595001 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EF2453 | SEG:seg | : | : | : | : |
Description
BnaC09g54660DBnaC09g54660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J674]
Coordinates
chrLK033666:-:48309..48815
Molecular Weight (calculated)
18849.1 Da
IEP (calculated)
8.606
GRAVY (calculated)
0.079
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYKSETRDS LSYNKMNNSE TLVRIESMAA ENAVVIFSMS TCSMCHAMKR LFRGMGVSPA VHELDLHPYG VDIHRALLRL LGCSSPTSPG ALPVVFIGRK
101: MIGSMERVMG FTYQRLTRPS SQRCWCSLAL TPCPQFTFSV FFSFSLLVTF LVSKNTKDEV NLSVELET
101: MIGSMERVMG FTYQRLTRPS SQRCWCSLAL TPCPQFTFSV FFSFSLLVTF LVSKNTKDEV NLSVELET
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.