Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 91.18 | 91.85 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 83.09 | 84.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 77.21 | 80.77 |
| KRG94592 | Soybean | plastid | 74.26 | 76.52 |
| EES05136 | Sorghum | cytosol | 71.32 | 75.19 |
| KRH06898 | Soybean | plastid | 72.79 | 73.88 |
| Os04t0393500-01 | Rice | cytosol | 72.79 | 73.33 |
| Solyc05g015910.1.1 | Tomato | cytosol | 69.85 | 72.52 |
| Zm00001d016593_P001 | Maize | cytosol | 69.12 | 72.31 |
| Zm00001d003927_P001 | Maize | cytosol | 72.06 | 71.53 |
| Os02t0512400-01 | Rice | cytosol | 70.59 | 71.11 |
| PGSC0003DMT400006076 | Potato | plastid | 69.85 | 70.9 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 69.12 | 70.15 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 69.12 | 70.15 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 69.12 | 70.15 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 68.38 | 69.4 |
| EES10652 | Sorghum | cytosol | 69.85 | 69.34 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 61.03 | 69.17 |
| KRH70543 | Soybean | cytosol | 66.91 | 68.42 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 60.29 | 68.33 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 60.29 | 68.33 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 58.82 | 66.67 |
| GSMUA_Achr5P00380_001 | Banana | extracellular | 50.0 | 66.02 |
| GSMUA_Achr8P09970_001 | Banana | cytosol | 49.26 | 65.05 |
| KRH01571 | Soybean | cytosol | 67.65 | 64.79 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 48.53 | 64.08 |
| AT3G02000.1 | Thale cress | cytosol | 61.76 | 61.76 |
| CDX91918 | Canola | cytosol | 60.29 | 61.19 |
| GSMUA_Achr1P26720_001 | Banana | cytosol | 46.32 | 61.16 |
| GSMUA_Achr11P... | Banana | cytosol | 46.32 | 61.16 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 58.09 | 60.77 |
| CDX74327 | Canola | cytosol | 61.03 | 60.58 |
| Bra000980.1-P | Field mustard | cytosol | 61.03 | 60.58 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 45.59 | 60.19 |
| PGSC0003DMT400013430 | Potato | cytosol | 57.35 | 60.0 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 68.38 | 59.62 |
| GSMUA_Achr7P03690_001 | Banana | cytosol | 44.85 | 59.22 |
| GSMUA_Achr8P33660_001 | Banana | cytosol | 44.85 | 59.22 |
| CDX70540 | Canola | cytosol | 59.56 | 59.12 |
| Bra006236.1-P | Field mustard | cytosol | 58.82 | 58.82 |
| CDX78558 | Canola | cytosol | 58.82 | 58.39 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular | 44.12 | 58.25 |
| CDX85614 | Canola | cytosol | 57.35 | 56.93 |
| Bra023448.1-P | Field mustard | cytosol | 57.35 | 56.93 |
| Bra008782.1-P | Field mustard | cytosol | 55.88 | 56.72 |
| AT5G14070.1 | Thale cress | cytosol | 58.09 | 56.43 |
| GSMUA_Achr5P00370_001 | Banana | cytosol | 42.65 | 56.31 |
| GSMUA_Achr4P22980_001 | Banana | endoplasmic reticulum, extracellular | 43.38 | 55.66 |
| CDX91084 | Canola | cytosol | 55.88 | 55.47 |
| GSMUA_Achr7P01150_001 | Banana | endoplasmic reticulum, extracellular | 41.91 | 52.78 |
| CDX69609 | Canola | cytosol | 36.03 | 48.51 |
| CDY58422 | Canola | cytosol | 46.32 | 37.5 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr6G23860_001 | EnsemblPlants:GSMUA_Achr6P23860_001 |
| EnsemblPlants:GSMUA_Achr6T23860_001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | UniProt:M0T9N4 | PFAM:PF00462 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0002954A7E | SEG:seg | : | : | : |
Description
Glutaredoxin-C3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G23860_001]
Coordinates
chr6:-:24237464..24237874
Molecular Weight (calculated)
13946.2 Da
IEP (calculated)
6.236
GRAVY (calculated)
0.565
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYQAASAAA EAWGYVAAAR GATMDALERV ERLAGESAVV IFSVSTCCMC HAVKRLFCGM GVSPMVVELD EDPRGGEMER ALARILGGGG AAVAGSAAVP
101: VVFIGGKLVG AMDRVMAAHI NGTLVPLLKD AGALWL
101: VVFIGGKLVG AMDRVMAAHI NGTLVPLLKD AGALWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.