Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 87.97 | 86.67 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 84.96 | 83.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 75.19 | 76.92 |
| EES05136 | Sorghum | cytosol | 72.93 | 75.19 |
| Zm00001d016593_P001 | Maize | cytosol | 71.43 | 73.08 |
| KRG94592 | Soybean | plastid | 71.43 | 71.97 |
| Os04t0393500-01 | Rice | cytosol | 71.43 | 70.37 |
| Os02t0512400-01 | Rice | cytosol | 71.43 | 70.37 |
| KRH06898 | Soybean | plastid | 70.68 | 70.15 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 70.68 | 70.15 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 70.68 | 70.15 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 69.92 | 69.4 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 69.92 | 69.4 |
| Zm00001d003927_P001 | Maize | cytosol | 71.43 | 69.34 |
| Solyc05g015910.1.1 | Tomato | cytosol | 67.67 | 68.7 |
| EES10652 | Sorghum | cytosol | 70.68 | 68.61 |
| GSMUA_Achr5P00380_001 | Banana | extracellular | 52.63 | 67.96 |
| KRH70543 | Soybean | cytosol | 67.67 | 67.67 |
| PGSC0003DMT400006076 | Potato | plastid | 67.67 | 67.16 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 59.4 | 65.83 |
| GSMUA_Achr8P09970_001 | Banana | cytosol | 50.38 | 65.05 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 58.65 | 65.0 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 58.65 | 65.0 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 57.14 | 63.33 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 48.87 | 63.11 |
| KRH01571 | Soybean | cytosol | 66.92 | 62.68 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 48.12 | 62.14 |
| Bra006236.1-P | Field mustard | cytosol | 61.65 | 60.29 |
| GSMUA_Achr11P... | Banana | cytosol | 46.62 | 60.19 |
| PGSC0003DMT400013430 | Potato | cytosol | 58.65 | 60.0 |
| CDX78558 | Canola | cytosol | 61.65 | 59.85 |
| CDX91918 | Canola | cytosol | 60.15 | 59.7 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 57.89 | 59.23 |
| GSMUA_Achr1P26720_001 | Banana | cytosol | 45.86 | 59.22 |
| CDX74327 | Canola | cytosol | 60.9 | 59.12 |
| CDX70540 | Canola | cytosol | 60.9 | 59.12 |
| Bra000980.1-P | Field mustard | cytosol | 60.9 | 59.12 |
| AT3G02000.1 | Thale cress | cytosol | 60.15 | 58.82 |
| AT5G14070.1 | Thale cress | cytosol | 61.65 | 58.57 |
| CDX85614 | Canola | cytosol | 60.15 | 58.39 |
| Bra023448.1-P | Field mustard | cytosol | 60.15 | 58.39 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular | 45.11 | 58.25 |
| GSMUA_Achr8P33660_001 | Banana | cytosol | 45.11 | 58.25 |
| GSMUA_Achr7P03690_001 | Banana | cytosol | 45.11 | 58.25 |
| Bra008782.1-P | Field mustard | cytosol | 58.65 | 58.21 |
| GSMUA_Achr5P00370_001 | Banana | cytosol | 44.36 | 57.28 |
| CDX91084 | Canola | cytosol | 58.65 | 56.93 |
| GSMUA_Achr4P22980_001 | Banana | endoplasmic reticulum, extracellular | 45.11 | 56.6 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 66.17 | 56.41 |
| GSMUA_Achr7P01150_001 | Banana | endoplasmic reticulum, extracellular | 43.61 | 53.7 |
| CDX69609 | Canola | cytosol | 36.84 | 48.51 |
| CDY58422 | Canola | cytosol | 51.13 | 40.48 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr3G18710_001 | EnsemblPlants:GSMUA_Achr3P18710_001 |
| EnsemblPlants:GSMUA_Achr3T18710_001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | UniProt:M0SFT7 | PFAM:PF00462 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00029634BC | SEG:seg | : | : | : |
Description
Glutaredoxin-C3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G18710_001]
Coordinates
chr3:-:20110061..20110462
Molecular Weight (calculated)
13829.1 Da
IEP (calculated)
6.496
GRAVY (calculated)
0.498
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYQAAAAAE AWGYVAGMGP TTTMDALERV ERMAAESAVV IFSVSTCCMC HALKRLFCGM GVSPSVVELD EDPRGREMER ALARLLGGGA AGGPAVPVVF
101: IGGKLVGAMD RVMAAHISGA LVPLLKQAGA LWL
101: IGGKLVGAMD RVMAAHISGA LVPLLKQAGA LWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.