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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • vacuole 1
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400024428
PGSC0003DMT400026710
PGSC0003DMT400033741
PGSC0003DMT400036790
PGSC0003DMT400043651
PGSC0003DMT400067114
PGSC0003DMT400070884
PGSC0003DMT400074101
PGSC0003DMT400092645

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02000.1 PGSC0003DMT400043651 AT1G22070.1 19218396
AT3G02000.1 PGSC0003DMT400070884 AT1G22070.1 19218396
AT3G02000.1 PGSC0003DMT400033741 AT1G68640.1 19218396
AT3G02000.1 PGSC0003DMT400043651 AT1G77920.1 19218396
AT3G02000.1 PGSC0003DMT400070884 AT1G77920.1 19218396
AT3G02000.1 PGSC0003DMT400024428 AT5G06960.1 19218396
AT3G02000.1 PGSC0003DMT400026710 AT5G06960.1 19218396
AT5G14070.1 PGSC0003DMT400092645 AT2G05230.1 21798944
AT5G14070.1 PGSC0003DMT400092645 AT2G05250.1 21798944
AT5G14070.1 PGSC0003DMT400036790 AT3G17860.1 21798944
AT5G14070.1 PGSC0003DMT400074101 AT3G17860.1 21798944
AT5G14070.1 PGSC0003DMT400067114 AT4G32570.1 21798944
AT5G14070.1 PGSC0003DMT400024428 AT5G06960.1 21798944
AT5G14070.1 PGSC0003DMT400026710 AT5G06960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g015910.1.1 Tomato cytosol 92.54 94.66
PGSC0003DMT400013435 Potato cytosol, plastid 69.4 77.5
GSMUA_Achr10P... Banana cytosol 74.63 74.07
PGSC0003DMT400013427 Potato mitochondrion, plastid 64.93 72.5
PGSC0003DMT400013430 Potato cytosol 70.15 72.31
KRG94592 Soybean plastid 70.9 71.97
KRH06898 Soybean plastid 70.15 70.15
GSMUA_Achr6P23860_001 Banana plastid 70.9 69.85
GSMUA_AchrUn_... Banana cytosol 66.42 68.46
EES05136 Sorghum cytosol 65.67 68.22
GSMUA_Achr3P18710_001 Banana cytosol 67.16 67.67
Zm00001d016593_P001 Maize cytosol 64.93 66.92
KRH70543 Soybean cytosol 66.42 66.92
HORVU0Hr1G003840.1 Barley extracellular 65.67 65.67
Zm00001d003927_P001 Maize cytosol 65.67 64.23
TraesCS2A01G285600.1 Wheat cytosol, extracellular 64.18 64.18
TraesCS2D01G284300.1 Wheat cytosol, extracellular 64.18 64.18
TraesCS2B01G302700.1 Wheat cytosol, extracellular 64.18 64.18
Os02t0512400-01 Rice cytosol 64.18 63.7
EES10652 Sorghum cytosol 64.93 63.5
VIT_01s0146g00220.t01 Wine grape cytosol 73.88 63.46
Os04t0393500-01 Rice cytosol 63.43 62.96
KRH01571 Soybean cytosol 65.67 61.97
PGSC0003DMT400058325 Potato cytosol 46.27 60.78
AT3G02000.1 Thale cress cytosol 58.96 58.09
Bra006236.1-P Field mustard cytosol 57.46 56.62
CDX78558 Canola cytosol 57.46 56.2
CDX70540 Canola cytosol 57.46 56.2
CDX91918 Canola cytosol 55.97 55.97
CDX74327 Canola cytosol 56.72 55.47
Bra000980.1-P Field mustard cytosol 56.72 55.47
PGSC0003DMT400058374 Potato cytosol 41.79 54.9
CDX85614 Canola cytosol 55.97 54.74
Bra023448.1-P Field mustard cytosol 55.97 54.74
AT5G14070.1 Thale cress cytosol 56.72 54.29
CDX91084 Canola cytosol 54.48 53.28
Bra008782.1-P Field mustard cytosol 52.99 52.99
PGSC0003DMT400029525 Potato cytosol 38.81 50.98
PGSC0003DMT400029597 Potato cytosol 38.06 50.0
PGSC0003DMT400046079 Potato cytosol 47.76 49.61
PGSC0003DMT400013649 Potato cytosol 37.31 49.02
CDX69609 Canola cytosol 36.57 48.51
PGSC0003DMT400079099 Potato cytosol 34.33 47.42
PGSC0003DMT400041378 Potato cytosol, plastid 35.82 47.06
PGSC0003DMT400042706 Potato cytosol 35.82 46.6
PGSC0003DMT400041381 Potato cytosol, plastid 35.07 46.08
PGSC0003DMT400029596 Potato cytosol 35.07 46.08
PGSC0003DMT400041380 Potato cytosol, plastid 33.58 44.12
PGSC0003DMT400027946 Potato cytosol, plastid 33.58 44.12
PGSC0003DMT400077393 Potato cytosol 33.58 43.69
PGSC0003DMT400027953 Potato cytosol, plastid 32.84 43.56
PGSC0003DMT400029673 Potato cytosol 34.33 43.4
PGSC0003DMT400041379 Potato cytosol, plastid 30.6 43.16
PGSC0003DMT400042707 Potato cytosol 32.84 43.14
PGSC0003DMT400027949 Potato cytosol, plastid 32.84 43.14
PGSC0003DMT400041382 Potato cytosol 32.84 43.14
PGSC0003DMT400027950 Potato cytosol, plastid 32.84 43.14
PGSC0003DMT400077394 Potato cytosol 32.84 42.31
PGSC0003DMT400027948 Potato cytosol, plastid 32.09 42.16
PGSC0003DMT400027954 Potato cytosol, plastid 32.09 42.16
PGSC0003DMT400027952 Potato cytosol 29.85 42.11
PGSC0003DMT400027947 Potato cytosol, plastid 31.34 41.18
PGSC0003DMT400027951 Potato cytosol, plastid 31.34 41.18
CDY58422 Canola cytosol 47.76 38.1
PGSC0003DMT400013650 Potato cytosol 29.85 13.56
Protein Annotations
EntrezGene:102601430MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2
InterPro:GlutaredoxinInterPro:IPR002109UniProt:M0ZQS9PFAM:PF00462EnsemblPlantsGene:PGSC0003DMG400002360PGSC:PGSC0003DMG400002360
EnsemblPlants:PGSC0003DMT400006076PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF62SUPFAM:SSF52833TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI000296257BRefSeq:XP_006359084.1:::
Description
Glutaredoxin, grx [Source:PGSC_GENE;Acc:PGSC0003DMG400002360]
Coordinates
chr5:-:15933811..15934215
Molecular Weight (calculated)
14312.5 Da
IEP (calculated)
8.656
GRAVY (calculated)
0.111
Length
134 amino acids
Sequence
(BLAST)
001: MYQAAESSSW GGGNSYHNIA TTRRASSSSD PLERVVRLAS GSAVVIFSMS TCCMCHAVKR LFCGMGVHPT VYELDQDPKG KEMERALSRL LGNSPGVPVV
101: FIGGKLIGAM DRVMASHING TLVPLLKEAG ALWL
Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.