Factsheet for PGSC0003DMT400029673

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001405
PGSC0003DMT400067114

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	PGSC0003DMT400001405	AT3G27960.1	21798944
AT2G30540.1	PGSC0003DMT400067114	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074570.1.1	Tomato	cytosol	83.96	83.96
VIT_07s0104g01390.t01	Wine grape	plasma membrane	65.09	67.65
KRH71536	Soybean	extracellular	63.21	66.34
KRH31919	Soybean	cytosol, plasma membrane	61.32	64.36
CDX84825	Canola	cytosol	61.32	63.73
CDY23990	Canola	cytosol	61.32	63.73
Bra031540.1-P	Field mustard	cytosol	59.43	63.64
CDY06230	Canola	cytosol	59.43	63.64
CDY09953	Canola	cytosol	59.43	63.64
CDY10229	Canola	cytosol	59.43	63.64
CDY54881	Canola	cytosol	59.43	63.64
KRG96386	Soybean	cytosol	60.38	63.37
KRH68125	Soybean	cytosol	60.38	63.37
Bra004424.1-P	Field mustard	cytosol	60.38	62.75
CDX80139	Canola	cytosol	60.38	62.75
CDX95739	Canola	cytosol	60.38	62.75
CDY53024	Canola	cytosol	60.38	62.75
AT1G06830.1	Thale cress	cytosol	58.49	62.63
AT2G30540.1	Thale cress	cytosol	59.43	61.76
AT2G47880.1	Thale cress	cytosol	59.43	61.76
Bra021641.1-P	Field mustard	cytosol	59.43	61.76
CDY29666	Canola	cytosol	59.43	61.76
CDY52638	Canola	cytosol	59.43	61.76
Bra018307.1-P	Field mustard	cytosol	58.49	60.78
CDY10745	Canola	cytosol	58.49	60.78
CDY27469	Canola	cytosol	59.43	60.0
CDY55528	Canola	cytosol	59.43	60.0
AT3G62960.1	Thale cress	cytosol	57.55	59.8
Bra014379.1-P	Field mustard	cytosol	57.55	59.8
CDX89162	Canola	cytosol	57.55	59.8
CDX97824	Canola	cytosol	57.55	59.8
CDY68061	Canola	cytosol	57.55	59.8
Bra021444.1-P	Field mustard	cytosol	58.49	59.05
Bra003517.1-P	Field mustard	cytosol, extracellular	56.6	58.82
Bra007718.1-P	Field mustard	cytosol	56.6	58.82
CDY11466	Canola	cytosol	56.6	58.82
CDX76678	Canola	cytosol	55.66	57.84
PGSC0003DMT400058374	Potato	cytosol	51.89	53.92
EES00745	Sorghum	cytosol	49.06	50.49
Os01t0368900-01	Rice	cytosol	49.06	50.49
TraesCS5B01G100900.1	Wheat	cytosol	49.06	50.49
TraesCS5A01G094700.1	Wheat	cytosol	48.11	49.51
TraesCS5D01G107200.1	Wheat	cytosol	48.11	49.51
Zm00001d040837_P001	Maize	cytosol	48.11	49.51
TraesCS5B01G049000.1	Wheat	cytosol	39.62	48.84
EES00746	Sorghum	cytosol	47.17	48.54
GSMUA_AchrUn_...	Banana	cytosol, extracellular	47.17	48.54
HORVU5Hr1G025680.1	Barley	cytosol	47.17	48.54
TraesCS5D01G054000.1	Wheat	cytosol	47.17	48.54
Zm00001d040836_P001	Maize	cytosol	47.17	48.54
Zm00001d027695_P001	Maize	cytosol	47.17	48.08
HORVU5Hr1G010960.1	Barley	cytosol	46.23	47.57
TraesCS5A01G044100.1	Wheat	cytosol	46.23	47.57
TraesCS5A01G044700.1	Wheat	cytosol	46.23	47.57
TraesCS5B01G048300.1	Wheat	cytosol	46.23	47.57
TraesCS5B01G048900.1	Wheat	cytosol	46.23	47.57
TraesCS5D01G054800.1	Wheat	cytosol	46.23	47.57
PGSC0003DMT400079099	Potato	cytosol	43.4	47.42
Zm00001d023873_P001	Maize	cytosol	46.23	47.12
GSMUA_Achr11P...	Banana	cytosol	45.28	46.6
GSMUA_Achr1P26720_001	Banana	cytosol	45.28	46.6
GSMUA_Achr8P33660_001	Banana	cytosol	45.28	46.6
Os12t0538600-00	Rice	cytosol, extracellular	45.28	46.6
TraesCS5A01G044900.1	Wheat	cytosol	45.28	46.6
TraesCS5B01G048400.1	Wheat	cytosol	45.28	46.6
TraesCS5B01G048600.1	Wheat	cytosol	45.28	46.6
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	45.28	46.6
TraesCS5D01G054200.1	Wheat	cytosol	45.28	46.6
TraesCS5D01G054900.1	Wheat	cytosol	45.28	46.6
TraesCS5D01G055100.1	Wheat	cytosol	45.28	46.6
HORVU5Hr1G025610.1	Barley	cytosol	45.28	46.15
TraesCS5A01G094500.1	Wheat	cytosol	45.28	46.15
TraesCS5A01G094600.1	Wheat	cytosol	45.28	46.15
TraesCS5B01G100600.1	Wheat	cytosol	45.28	46.15
TraesCS5D01G106800.1	Wheat	cytosol	45.28	46.15
EES16092	Sorghum	cytosol	45.28	45.71
HORVU5Hr1G033140.1	Barley	cytosol	45.28	45.71
GSMUA_Achr11P...	Banana	cytosol, extracellular	44.34	45.63
GSMUA_Achr7P03690_001	Banana	cytosol	44.34	45.63
GSMUA_Achr8P09970_001	Banana	cytosol	44.34	45.63
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	44.34	45.63
TraesCS5A01G044400.1	Wheat	cytosol	44.34	45.63
TraesCS5A01G045000.1	Wheat	cytosol	44.34	45.63
TraesCS5A01G094900.1	Wheat	extracellular	44.34	45.63
TraesCS5B01G049100.1	Wheat	cytosol	44.34	45.63
TraesCS5B01G049200.1	Wheat	cytosol	44.34	45.63
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	44.34	45.63
TraesCS5D01G054400.1	Wheat	cytosol	44.34	45.63
TraesCS5D01G055000.1	Wheat	cytosol	44.34	45.63
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	44.34	45.63
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	44.34	45.63
PGSC0003DMT400041379	Potato	cytosol, plastid	40.57	45.26
TraesCS5B01G100700.1	Wheat	cytosol	44.34	45.19
TraesCS5D01G106900.1	Wheat	cytosol	44.34	45.19
PGSC0003DMT400042707	Potato	cytosol	43.4	45.1
EES02025	Sorghum	cytosol	45.28	44.86
GSMUA_Achr11P...	Banana	cytosol, extracellular	43.4	44.66
HORVU5Hr1G010870.1	Barley	cytosol	43.4	44.66
TraesCS5A01G044800.1	Wheat	cytosol	43.4	44.66
TraesCS5A01G095500.1	Wheat	cytosol	43.4	44.66
TraesCS5D01G107300.1	Wheat	cytosol	43.4	44.66
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	43.4	44.23
TraesCS3A01G462200.1	Wheat	cytosol	43.4	44.23
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	43.4	44.23
PGSC0003DMT400058325	Potato	cytosol	42.45	44.12
Os11t0656000-00	Rice	cytosol, plastid	45.28	44.04
GSMUA_Achr5P00370_001	Banana	cytosol	42.45	43.69
GSMUA_Achr5P00380_001	Banana	extracellular	42.45	43.69
HORVU5Hr1G010950.1	Barley	cytosol	42.45	43.69
TraesCS5B01G101000.1	Wheat	cytosol	42.45	43.69
Os12t0538700-01	Rice	cytosol	42.45	43.27
TraesCS3A01G463000.1	Wheat	cytosol	42.45	43.27
TraesCS3B01G504700.1	Wheat	cytosol	42.45	43.27
TraesCS3D01G456900.1	Wheat	cytosol	42.45	43.27
Zm00001d023869_P001	Maize	cytosol	42.45	43.27
Zm00001d023870_P001	Maize	cytosol, extracellular	42.45	43.27
Os11t0656400-00	Rice	cytosol, plastid	44.34	43.12
Os11t0656700-00	Rice	cytosol, plastid	44.34	43.12
PGSC0003DMT400077393	Potato	cytosol	41.51	42.72
TraesCS5A01G094800.1	Wheat	cytosol	41.51	42.72
Zm00001d042187_P001	Maize	cytosol	44.34	42.34
TraesCS3B01G506200.1	Wheat	cytosol	41.51	42.31
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	41.51	42.31
PGSC0003DMT400027947	Potato	cytosol, plastid	40.57	42.16
PGSC0003DMT400027951	Potato	cytosol, plastid	40.57	42.16
OQU79243	Sorghum	cytosol	42.45	42.06
Zm00001d023872_P001	Maize	cytosol, mitochondrion	41.51	41.9
TraesCS3B01G505300.1	Wheat	cytosol	40.57	41.35
TraesCS4D01G147300.1	Wheat	cytosol	40.57	41.35
Os05t0149950-00	Rice	cytosol, mitochondrion	44.34	41.23
PGSC0003DMT400029596	Potato	cytosol	39.62	41.18
PGSC0003DMT400041378	Potato	cytosol, plastid	39.62	41.18
PGSC0003DMT400041380	Potato	cytosol, plastid	39.62	41.18
PGSC0003DMT400041381	Potato	cytosol, plastid	39.62	41.18
PGSC0003DMT400041382	Potato	cytosol	39.62	41.18
EES16097	Sorghum	cytosol	41.51	41.12
HORVU5Hr1G025690.1	Barley	cytosol	43.4	41.07
PGSC0003DMT400027952	Potato	cytosol	36.79	41.05
EES16093	Sorghum	cytosol	40.57	40.95
PGSC0003DMT400042706	Potato	cytosol	39.62	40.78
HORVU3Hr1G099090.1	Barley	cytosol	39.62	40.38
TraesCS3B01G506500.1	Wheat	cytosol	39.62	40.38
PGSC0003DMT400027946	Potato	cytosol, plastid	38.68	40.2
PGSC0003DMT400027948	Potato	cytosol, plastid	38.68	40.2
PGSC0003DMT400027950	Potato	cytosol, plastid	38.68	40.2
PGSC0003DMT400027954	Potato	cytosol, plastid	38.68	40.2
PGSC0003DMT400029525	Potato	cytosol	38.68	40.2
Bra015532.1-P	Field mustard	cytosol	54.72	40.0
EES16096	Sorghum	cytosol	39.62	40.0
Os11t0655900-01	Rice	extracellular	40.57	39.81
EES17138	Sorghum	cytosol	39.62	39.62
PGSC0003DMT400077394	Potato	cytosol	38.68	39.42
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	38.68	39.42
TraesCS3A01G463200.1	Wheat	cytosol	38.68	39.42
PGSC0003DMT400027949	Potato	cytosol, plastid	37.74	39.22
PGSC0003DMT400029597	Potato	cytosol	37.74	39.22
Zm00001d048719_P001	Maize	cytosol	40.57	39.09
PGSC0003DMT400027953	Potato	cytosol, plastid	36.79	38.61
TraesCS3B01G506400.1	Wheat	cytosol	37.74	38.46
TraesCS3D01G457200.1	Wheat	cytosol	37.74	38.46
HORVU3Hr1G099050.2	Barley	cytosol	38.68	37.96
EES08918	Sorghum	cytosol, plastid	36.79	37.14
Zm00001d048720_P001	Maize	cytosol	38.68	36.94
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	22.64	36.92
CDY71728	Canola	cytosol	49.06	36.62
PGSC0003DMT400013649	Potato	cytosol	34.91	36.27
Os01t0936000-00	Rice	cytosol	42.45	36.0
PGSC0003DMT400013435	Potato	cytosol, plastid	40.57	35.83
PGSC0003DMT400013430	Potato	cytosol	43.4	35.38
HORVU5Hr1G025560.1	Barley	cytosol	45.28	35.29
EES08919	Sorghum	cytosol	35.85	34.86
PGSC0003DMT400006076	Potato	plastid	43.4	34.33
PGSC0003DMT400013427	Potato	mitochondrion, plastid	38.68	34.17
TraesCS3A01G462800.1	Wheat	extracellular	25.47	32.93
TraesCS3B01G506000.1	Wheat	mitochondrion	25.47	32.93
HORVU0Hr1G010190.2	Barley	cytosol	29.25	29.52
CDX97821	Canola	mitochondrion	36.79	29.32
PGSC0003DMT400046079	Potato	cytosol	33.02	27.13
PGSC0003DMT400013650	Potato	cytosol	56.6	20.34

Protein Annotations

EntrezGene:102581681	MapMan:18.8.2	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M1AT87
PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400011406	PGSC:PGSC0003DMG400011406	EnsemblPlants:PGSC0003DMT400029673	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF57	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI00029564DC
RefSeq:XP_006359428.1	:	:	:	:	:

Description

Glutaredoxin [Source:PGSC_GENE;Acc:PGSC0003DMG400011406]

Coordinates

chr9:-:52077978..52078723

Molecular Weight (calculated)

11803.7 Da

IEP (calculated)

7.439

GRAVY (calculated)

0.253

Length

106 amino acids

Sequence
(BLAST)

001: MEKVQRMTRE HGVVIFSKST CCLSYAVSIL FQDLGVIPYV CEIDHESDGK EMEKALIRMG VNSSFMFPAI FIGGLLVGST NEVMSLHLQG SLIKLIKPYM
101: SNLKSN

Best Arabidopsis Sequence Match ( AT2G30540.1 )
(BLAST)

001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPECR EIEKALMRLG CSTPVPAIFV GGKLIGSTNE VMSLHLSGSL VPLVKPFQAN
101: LC

Arabidopsis Description

GRXS9Monothiol glutaredoxin-S9 [Source:UniProtKB/Swiss-Prot;Acc:O04341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.