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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • mitochondrion 2
  • cytosol 3
  • plastid 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER89393
EES05647
EES05874
EES07800
EES07899
EES10633
EES10933
KXG27287
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 EES05647 AT3G27960.1 21798944
AT4G15700.1 KXG27287 AT1G22920.1 21798944
AT4G15700.1 EER89393 AT1G73360.1 21798944
AT4G15700.1 EES05874 AT1G73360.1 21798944
AT4G15700.1 EES07899 AT2G05230.1 21798944
AT4G15700.1 EES10633 AT2G05230.1 21798944
AT4G15700.1 EES10933 AT2G05230.1 21798944
AT4G15700.1 KXG34016 AT2G05230.1 21798944
AT4G15700.1 OQU85000 AT2G05230.1 21798944
AT4G15700.1 EES07899 AT2G05250.1 21798944
AT4G15700.1 EES10633 AT2G05250.1 21798944
AT4G15700.1 EES10933 AT2G05250.1 21798944
AT4G15700.1 KXG34016 AT2G05250.1 21798944
AT4G15700.1 OQU85000 AT2G05250.1 21798944
AT4G15700.1 EES07800 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023869_P001 Maize cytosol 94.29 95.19
EES17138 Sorghum cytosol 95.24 94.34
TraesCS5A01G094500.1 Wheat cytosol 81.9 82.69
TraesCS5B01G100600.1 Wheat cytosol 81.9 82.69
TraesCS5D01G106800.1 Wheat cytosol 81.9 82.69
HORVU5Hr1G033140.1 Barley cytosol 81.9 81.9
Os12t0538700-01 Rice cytosol 80.95 81.73
TraesCS5B01G101000.1 Wheat cytosol 80.0 81.55
TraesCS5D01G107300.1 Wheat cytosol 80.0 81.55
TraesCS5A01G094800.1 Wheat cytosol 78.1 79.61
HORVU5Hr1G025690.1 Barley cytosol 80.95 75.89
EES02025 Sorghum cytosol 67.62 66.36
EES00745 Sorghum cytosol 64.76 66.02
EES16092 Sorghum cytosol 65.71 65.71
EES00746 Sorghum cytosol 63.81 65.05
GSMUA_Achr11P... Banana cytosol, extracellular 62.86 64.08
GSMUA_Achr8P09970_001 Banana cytosol 62.86 64.08
HORVU5Hr1G025560.1 Barley cytosol 81.9 63.24
OQU79243 Sorghum cytosol 63.81 62.62
EES08918 Sorghum cytosol, plastid 61.9 61.9
EES16097 Sorghum cytosol 62.86 61.68
EES08919 Sorghum cytosol 61.9 59.63
AT2G47870.1 Thale cress cytosol 57.14 58.25
VIT_05s0020g01750.t01 Wine grape cytosol 57.14 58.25
PGSC0003DMT400058374 Potato cytosol 56.19 57.84
Solyc01g067460.1.1 Tomato cytosol 56.19 57.84
CDY53023 Canola cytosol 56.19 57.28
KRH02215 Soybean cytosol 55.24 56.86
Solyc01g067440.2.1 Tomato cytosol 55.24 56.86
VIT_05s0020g01760.t01 Wine grape cytosol 55.24 56.86
KRG96386 Soybean cytosol 54.29 56.44
KRH68125 Soybean cytosol 54.29 56.44
Bra004426.1-P Field mustard cytosol 55.24 56.31
CDX80138 Canola cytosol 55.24 56.31
EES16096 Sorghum cytosol 56.19 56.19
KRH31918 Soybean cytosol 54.29 55.88
KRH71537 Soybean cytosol 54.29 55.88
PGSC0003DMT400058325 Potato cytosol 54.29 55.88
KRH71536 Soybean extracellular 53.33 55.45
AT3G62950.1 Thale cress cytosol 54.29 55.34
Bra014380.1-P Field mustard cytosol 54.29 55.34
CDX89161 Canola cytosol 54.29 55.34
Bra002171.1-P Field mustard cytosol 53.33 54.9
CDX92597 Canola cytosol 53.33 54.9
CDY13904 Canola cytosol 53.33 54.9
KRH11237 Soybean cytosol 53.33 54.9
KRH50911 Soybean cytosol 53.33 54.9
Bra023688.1-P Field mustard cytosol 52.38 53.92
CDY68328 Canola cytosol 52.38 53.92
KRH21036 Soybean cytosol 52.38 53.92
KRH31919 Soybean cytosol, plasma membrane 51.43 53.47
CDX76677 Canola cytosol 52.38 53.4
CDY11464 Canola cytosol 52.38 53.4
CDY11465 Canola cytosol 52.38 53.4
HORVU0Hr1G010190.2 Barley cytosol 53.33 53.33
Bra006467.1-P Field mustard cytosol 51.43 52.94
CDX70828 Canola cytosol 51.43 52.94
CDX88929 Canola cytosol 51.43 52.94
CDY02610 Canola cytosol 51.43 52.94
KRH11238 Soybean cytosol 51.43 52.94
KRH21035 Soybean cytosol 51.43 52.94
VIT_07s0104g01390.t01 Wine grape plasma membrane 51.43 52.94
PGSC0003DMT400079099 Potato cytosol 48.57 52.58
Solyc06g008760.1.1 Tomato cytosol 50.48 52.48
Bra007717.1-P Field mustard cytosol 38.1 51.95
Bra031540.1-P Field mustard cytosol 48.57 51.52
CDY06230 Canola cytosol 48.57 51.52
CDY09953 Canola cytosol 48.57 51.52
Solyc06g054570.1.1 Tomato cytosol 50.48 51.46
AT4G15700.1 Thale cress cytosol 49.52 50.98
CDY32430 Canola cytosol, plastid 49.52 50.98
KRG96387 Soybean cytosol 49.52 50.98
KRH50912 Soybean cytosol 49.52 50.98
KRH68127 Soybean cytosol 49.52 50.98
PGSC0003DMT400013649 Potato cytosol 49.52 50.98
PGSC0003DMT400029525 Potato cytosol 49.52 50.98
PGSC0003DMT400029596 Potato cytosol 49.52 50.98
Solyc09g074590.1.1 Tomato cytosol 49.52 50.98
VIT_07s0104g01400.t01 Wine grape cytosol 49.52 50.98
AT1G06830.1 Thale cress cytosol 47.62 50.51
AT2G30540.1 Thale cress cytosol 48.57 50.0
AT3G21460.1 Thale cress mitochondrion 48.57 50.0
AT4G15690.1 Thale cress cytosol 48.57 50.0
AT5G18600.1 Thale cress cytosol 48.57 50.0
Bra001830.1-P Field mustard cytosol, plastid 48.57 50.0
CDY48890 Canola cytosol, plastid 48.57 50.0
PGSC0003DMT400029597 Potato cytosol 48.57 50.0
Solyc06g008750.1.1 Tomato cytosol 48.57 50.0
Solyc09g074580.1.1 Tomato cytosol 48.57 50.0
Solyc09g074600.1.1 Tomato cytosol 48.57 50.0
CDY10229 Canola cytosol 46.67 49.49
CDY54881 Canola cytosol 46.67 49.49
AT2G47880.1 Thale cress cytosol 47.62 49.02
AT4G15660.1 Thale cress cytosol, extracellular 47.62 49.02
Bra021641.1-P Field mustard cytosol 47.62 49.02
Bra023883.1-P Field mustard cytosol, plastid 47.62 49.02
Bra033503.1-P Field mustard cytosol 47.62 49.02
CDX97824 Canola cytosol 47.62 49.02
CDY19270 Canola cytosol, plastid 47.62 49.02
CDY23990 Canola cytosol 47.62 49.02
CDY29666 Canola cytosol 47.62 49.02
CDY37292 Canola cytosol, plastid 47.62 49.02
CDY52638 Canola cytosol 47.62 49.02
CDY66333 Canola cytosol 47.62 49.02
Bra033504.1-P Field mustard cytosol 44.76 48.96
PGSC0003DMT400042706 Potato cytosol 47.62 48.54
AT4G15670.1 Thale cress cytosol 46.67 48.04
AT4G15680.1 Thale cress cytosol 46.67 48.04
Bra001831.1-P Field mustard cytosol 46.67 48.04
Bra018307.1-P Field mustard cytosol 46.67 48.04
Bra033501.1-P Field mustard cytosol 46.67 48.04
CDX84825 Canola cytosol 46.67 48.04
CDX95739 Canola cytosol 46.67 48.04
CDY10745 Canola cytosol 46.67 48.04
CDY32431 Canola cytosol 46.67 48.04
CDY48891 Canola cytosol 46.67 48.04
CDY54294 Canola cytosol 46.67 48.04
Bra033499.1-P Field mustard cytosol 44.76 47.96
CDY27469 Canola cytosol 47.62 47.62
AT3G62960.1 Thale cress cytosol 45.71 47.06
Bra004424.1-P Field mustard cytosol 45.71 47.06
Bra007718.1-P Field mustard cytosol 45.71 47.06
Bra012773.1-P Field mustard cytosol 45.71 47.06
CDX76678 Canola cytosol 45.71 47.06
CDX80139 Canola cytosol 45.71 47.06
CDX90576 Canola cytosol 45.71 47.06
CDY09079 Canola cytosol 45.71 47.06
CDY09747 Canola cytosol 45.71 47.06
CDY11466 Canola cytosol 45.71 47.06
CDY22746 Canola cytosol 45.71 47.06
CDY53024 Canola cytosol 45.71 47.06
CDY66332 Canola cytosol 45.71 47.06
KRH68129 Soybean cytosol 45.71 47.06
PGSC0003DMT400041380 Potato cytosol, plastid 45.71 47.06
PGSC0003DMT400041381 Potato cytosol, plastid 45.71 47.06
EES10652 Sorghum cytosol 60.95 46.72
CDY55528 Canola cytosol 46.67 46.67
Bra038076.1-P Field mustard cytosol, extracellular 44.76 46.53
CDY09078 Canola cytosol, extracellular 44.76 46.53
CDY22745 Canola cytosol, extracellular 44.76 46.53
EES05136 Sorghum cytosol 57.14 46.51
CDY69190 Canola cytosol 45.71 46.15
Bra014379.1-P Field mustard cytosol 44.76 46.08
Bra038075.1-P Field mustard cytosol 44.76 46.08
CDX89162 Canola cytosol 44.76 46.08
CDY54296 Canola cytosol 44.76 46.08
CDY68061 Canola cytosol 44.76 46.08
KRG96389 Soybean cytosol 44.76 46.08
Bra021444.1-P Field mustard cytosol 45.71 45.71
AT1G03020.1 Thale cress cytosol 43.81 45.1
Bra032563.1-P Field mustard cytosol 43.81 45.1
Bra033366.1-P Field mustard cytosol 43.81 45.1
CDX89921 Canola cytosol 43.81 45.1
CDY32493 Canola cytosol 43.81 45.1
Solyc04g011790.1.1 Tomato cytosol, plastid 43.81 45.1
Solyc04g011830.1.1 Tomato cytosol, plastid 43.81 45.1
Solyc04g011870.1.1 Tomato cytosol, plastid 43.81 45.1
PGSC0003DMT400027953 Potato cytosol, plastid 42.86 44.55
VIT_07s0104g01420.t01 Wine grape cytosol 44.76 44.34
PGSC0003DMT400041379 Potato cytosol, plastid 40.0 44.21
Solyc04g011820.1.1 Tomato cytosol 40.0 44.21
Bra003517.1-P Field mustard cytosol, extracellular 42.86 44.12
CDY18141 Canola cytosol 42.86 44.12
PGSC0003DMT400027946 Potato cytosol, plastid 42.86 44.12
PGSC0003DMT400027948 Potato cytosol, plastid 42.86 44.12
PGSC0003DMT400027951 Potato cytosol, plastid 42.86 44.12
PGSC0003DMT400041382 Potato cytosol 42.86 44.12
Solyc04g011810.1.1 Tomato cytosol, plastid 42.86 44.12
PGSC0003DMT400027952 Potato cytosol 39.05 43.16
Bra003515.1-P Field mustard cytosol 41.9 43.14
CDX67910 Canola cytosol 41.9 43.14
PGSC0003DMT400027949 Potato cytosol, plastid 41.9 43.14
PGSC0003DMT400027950 Potato cytosol, plastid 41.9 43.14
PGSC0003DMT400027954 Potato cytosol, plastid 41.9 43.14
PGSC0003DMT400041378 Potato cytosol, plastid 41.9 43.14
Solyc04g011800.1.1 Tomato cytosol, plastid 41.9 43.14
Solyc04g011840.1.1 Tomato cytosol 41.9 43.14
Solyc04g011850.1.1 Tomato cytosol 41.9 43.14
Solyc04g011860.1.1 Tomato cytosol, plastid 41.9 43.14
PGSC0003DMT400077394 Potato cytosol 41.9 42.31
Solyc05g051720.1.1 Tomato cytosol 41.9 42.31
PGSC0003DMT400027947 Potato cytosol, plastid 40.95 42.16
KRH68130 Soybean cytosol, plastid 41.9 41.9
AT3G62930.1 Thale cress cytosol 40.0 41.18
Bra014382.1-P Field mustard cytosol 40.0 41.18
CDX89159 Canola cytosol 40.0 41.18
CDX93949 Canola cytosol 40.0 41.18
CDY25124 Canola cytosol 40.0 41.18
Solyc04g011780.1.1 Tomato extracellular 40.0 41.18
Solyc04g011880.1.1 Tomato cytosol, plastid 40.0 41.18
Solyc04g053110.1.1 Tomato cytosol 40.0 41.18
KRH31916 Soybean cytosol 37.14 41.05
PGSC0003DMT400077393 Potato cytosol 40.0 40.78
Solyc05g051730.1.1 Tomato cytosol 40.0 40.78
PGSC0003DMT400029673 Potato cytosol 40.95 40.57
PGSC0003DMT400042707 Potato cytosol 39.05 40.2
KRG96390 Soybean cytosol, plastid 40.0 40.0
Bra007714.1-P Field mustard cytosol 38.1 39.22
CDX76675 Canola cytosol 38.1 39.22
CDY11462 Canola cytosol 38.1 39.22
KRH31917 Soybean cytosol 38.1 39.22
KRH71538 Soybean cytosol 38.1 39.22
Solyc09g074570.1.1 Tomato cytosol 38.1 37.74
KRH31915 Soybean cytosol, plastid 37.14 37.14
EER95872 Sorghum cytosol 49.52 31.33
Bra015532.1-P Field mustard cytosol 42.86 31.03
CDY71728 Canola cytosol 40.0 29.58
CDX97821 Canola mitochondrion 36.19 28.57
PGSC0003DMT400013650 Potato cytosol 40.0 14.24
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10UniProt:C5YPD0EnsemblPlants:EES16093ProteinID:EES16093ProteinID:EES16093.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900
GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109
ProteinID:KXG18628.1PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF83
EnsemblPlantsGene:SORBI_3008G117400SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0001A88426RefSeq:XP_002442255.1
RefSeq:XP_002442256.1:::::
Description
hypothetical protein
Coordinates
chr8:+:52805355..52806164
Molecular Weight (calculated)
11298.1 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.302
Length
105 amino acids
Sequence
(BLAST)
001: MAERVSRLST EKAVVIFTTS QCPMCHTVTS LLISELGVCA AVHELDKDPR GRDMERELAR CLGRAPPVPA VFIGGRLVGS TDKIMSLHLA GKLVPMLKAA
101: GAIWL
Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)
001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL
Arabidopsis Description
GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.