Factsheet for VIT_07s0104g01390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_04s0008g04950.t01
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01
VIT_14s0066g01280.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G30540.1	VIT_14s0066g01280.t01	AT3G27960.1	21798944
AT2G30540.1	VIT_04s0008g04950.t01	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96386	Soybean	cytosol	85.29	86.14
KRH68125	Soybean	cytosol	85.29	86.14
KRH31919	Soybean	cytosol, plasma membrane	81.37	82.18
KRH71536	Soybean	extracellular	79.41	80.2
Bra031540.1-P	Field mustard	cytosol	76.47	78.79
CDY06230	Canola	cytosol	76.47	78.79
CDY09953	Canola	cytosol	76.47	78.79
CDY10229	Canola	cytosol	74.51	76.77
CDY54881	Canola	cytosol	74.51	76.77
AT2G47880.1	Thale cress	cytosol	76.47	76.47
CDY23990	Canola	cytosol	76.47	76.47
AT1G06830.1	Thale cress	cytosol	73.53	75.76
Bra004424.1-P	Field mustard	cytosol	75.49	75.49
CDX80139	Canola	cytosol	75.49	75.49
CDX84825	Canola	cytosol	75.49	75.49
CDX95739	Canola	cytosol	75.49	75.49
CDY53024	Canola	cytosol	75.49	75.49
Bra021641.1-P	Field mustard	cytosol	74.51	74.51
CDY29666	Canola	cytosol	74.51	74.51
CDY52638	Canola	cytosol	74.51	74.51
AT2G30540.1	Thale cress	cytosol	73.53	73.53
AT3G62960.1	Thale cress	cytosol	73.53	73.53
Bra014379.1-P	Field mustard	cytosol	73.53	73.53
Bra018307.1-P	Field mustard	cytosol	73.53	73.53
CDX89162	Canola	cytosol	73.53	73.53
CDY10745	Canola	cytosol	73.53	73.53
CDY68061	Canola	cytosol	73.53	73.53
CDY27469	Canola	cytosol	75.49	73.33
CDY55528	Canola	cytosol	75.49	73.33
CDX97824	Canola	cytosol	72.55	72.55
Bra021444.1-P	Field mustard	cytosol	74.51	72.38
Bra003517.1-P	Field mustard	cytosol, extracellular	71.57	71.57
Bra007718.1-P	Field mustard	cytosol	71.57	71.57
CDY11466	Canola	cytosol	71.57	71.57
Solyc06g008760.1.1	Tomato	cytosol	70.59	71.29
CDX76678	Canola	cytosol	70.59	70.59
PGSC0003DMT400029673	Potato	cytosol	67.65	65.09
EES00746	Sorghum	cytosol	65.69	65.05
Zm00001d040837_P001	Maize	cytosol	65.69	65.05
Os01t0368900-01	Rice	cytosol	64.71	64.08
Zm00001d027695_P001	Maize	cytosol	63.73	62.5
Solyc09g074570.1.1	Tomato	cytosol	64.71	62.26
GSMUA_Achr1P26720_001	Banana	cytosol	62.75	62.14
Os12t0538600-00	Rice	cytosol, extracellular	61.76	61.16
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	61.76	61.16
EES00745	Sorghum	cytosol	60.78	60.19
GSMUA_Achr11P...	Banana	cytosol	60.78	60.19
GSMUA_Achr5P00380_001	Banana	extracellular	60.78	60.19
GSMUA_Achr8P33660_001	Banana	cytosol	60.78	60.19
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	60.78	60.19
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	60.78	60.19
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	60.78	60.19
Zm00001d040836_P001	Maize	cytosol	60.78	60.19
VIT_05s0020g01760.t01	Wine grape	cytosol	59.8	59.8
GSMUA_Achr11P...	Banana	cytosol, extracellular	59.8	59.22
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	59.8	59.22
TraesCS5A01G094900.1	Wheat	extracellular	59.8	59.22
TraesCS5A01G095500.1	Wheat	cytosol	59.8	59.22
TraesCS5B01G100900.1	Wheat	cytosol	59.8	59.22
VIT_05s0020g01750.t01	Wine grape	cytosol	59.8	59.22
GSMUA_AchrUn_...	Banana	cytosol, extracellular	58.82	58.25
TraesCS5A01G094700.1	Wheat	cytosol	58.82	58.25
TraesCS5D01G107200.1	Wheat	cytosol	58.82	58.25
HORVU5Hr1G025610.1	Barley	cytosol	58.82	57.69
GSMUA_Achr8P09970_001	Banana	cytosol	57.84	57.28
HORVU5Hr1G010960.1	Barley	cytosol	57.84	57.28
TraesCS5A01G044700.1	Wheat	cytosol	57.84	57.28
TraesCS5A01G044900.1	Wheat	cytosol	57.84	57.28
TraesCS5B01G048900.1	Wheat	cytosol	57.84	57.28
TraesCS5D01G054000.1	Wheat	cytosol	57.84	57.28
TraesCS5D01G054200.1	Wheat	cytosol	57.84	57.28
TraesCS5D01G054800.1	Wheat	cytosol	57.84	57.28
TraesCS5D01G054900.1	Wheat	cytosol	57.84	57.28
TraesCS5B01G049000.1	Wheat	cytosol	48.04	56.98
TraesCS5A01G094600.1	Wheat	cytosol	57.84	56.73
TraesCS5B01G100700.1	Wheat	cytosol	57.84	56.73
GSMUA_Achr7P03690_001	Banana	cytosol	56.86	56.31
HORVU5Hr1G025680.1	Barley	cytosol	56.86	56.31
TraesCS5A01G044100.1	Wheat	cytosol	56.86	56.31
TraesCS5A01G045000.1	Wheat	cytosol	56.86	56.31
TraesCS5B01G048300.1	Wheat	cytosol	56.86	56.31
TraesCS5B01G048400.1	Wheat	cytosol	56.86	56.31
TraesCS5B01G048600.1	Wheat	cytosol	56.86	56.31
TraesCS5B01G049100.1	Wheat	cytosol	56.86	56.31
TraesCS5B01G049200.1	Wheat	cytosol	56.86	56.31
TraesCS5D01G055000.1	Wheat	cytosol	56.86	56.31
EES02025	Sorghum	cytosol	58.82	56.07
TraesCS5D01G106900.1	Wheat	cytosol	56.86	55.77
GSMUA_Achr11P...	Banana	cytosol, extracellular	55.88	55.34
GSMUA_Achr5P00370_001	Banana	cytosol	55.88	55.34
HORVU5Hr1G010870.1	Barley	cytosol	55.88	55.34
TraesCS5A01G044400.1	Wheat	cytosol	55.88	55.34
TraesCS5A01G044800.1	Wheat	cytosol	55.88	55.34
TraesCS5D01G054400.1	Wheat	cytosol	55.88	55.34
TraesCS5D01G055100.1	Wheat	cytosol	55.88	55.34
TraesCS5D01G107300.1	Wheat	cytosol	55.88	55.34
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	55.88	54.81
TraesCS3A01G462200.1	Wheat	cytosol	55.88	54.81
TraesCS3A01G463000.1	Wheat	cytosol	55.88	54.81
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	55.88	54.81
TraesCS3D01G456900.1	Wheat	cytosol	55.88	54.81
TraesCS5A01G094500.1	Wheat	cytosol	55.88	54.81
TraesCS5B01G100600.1	Wheat	cytosol	55.88	54.81
TraesCS5D01G106800.1	Wheat	cytosol	55.88	54.81
Zm00001d023873_P001	Maize	cytosol	55.88	54.81
TraesCS5B01G101000.1	Wheat	cytosol	54.9	54.37
HORVU5Hr1G033140.1	Barley	cytosol	55.88	54.29
TraesCS3B01G504700.1	Wheat	cytosol	54.9	53.85
Zm00001d023870_P001	Maize	cytosol, extracellular	54.9	53.85
TraesCS5A01G094800.1	Wheat	cytosol	53.92	53.4
EES16092	Sorghum	cytosol	54.9	53.33
Os11t0656000-00	Rice	cytosol, plastid	56.86	53.21
Zm00001d042187_P001	Maize	cytosol	57.84	53.15
HORVU3Hr1G099090.1	Barley	cytosol	53.92	52.88
Os12t0538700-01	Rice	cytosol	53.92	52.88
TraesCS3A01G463200.1	Wheat	cytosol	53.92	52.88
TraesCS3B01G506200.1	Wheat	cytosol	53.92	52.88
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	53.92	52.88
TraesCS4D01G147300.1	Wheat	cytosol	53.92	52.88
Zm00001d023869_P001	Maize	cytosol	53.92	52.88
HORVU5Hr1G010950.1	Barley	cytosol	52.94	52.43
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	52.94	51.92
TraesCS3B01G505300.1	Wheat	cytosol	52.94	51.92
TraesCS3B01G506500.1	Wheat	cytosol	52.94	51.92
TraesCS3D01G457200.1	Wheat	cytosol	52.94	51.92
EES16093	Sorghum	cytosol	52.94	51.43
Zm00001d023872_P001	Maize	cytosol, mitochondrion	52.94	51.43
OQU79243	Sorghum	cytosol	53.92	51.4
Os11t0656700-00	Rice	cytosol, plastid	54.9	51.38
VIT_07s0104g01400.t01	Wine grape	cytosol	50.98	50.98
TraesCS3B01G506400.1	Wheat	cytosol	51.96	50.96
HORVU5Hr1G025690.1	Barley	cytosol	55.88	50.89
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	32.35	50.77
EES16096	Sorghum	cytosol	51.96	50.48
EES16097	Sorghum	cytosol	52.94	50.47
Os11t0656400-00	Rice	cytosol, plastid	53.92	50.46
EES17138	Sorghum	cytosol	51.96	50.0
Os05t0149950-00	Rice	cytosol, mitochondrion	54.9	49.12
Os11t0655900-01	Rice	extracellular	51.96	49.07
Bra015532.1-P	Field mustard	cytosol	68.63	48.28
HORVU3Hr1G099050.2	Barley	cytosol	50.98	48.15
Zm00001d048720_P001	Maize	cytosol	51.96	47.75
VIT_14s0068g01570.t01	Wine grape	cytosol	56.86	47.15
Zm00001d048719_P001	Maize	cytosol	50.0	46.36
TraesCS3A01G462800.1	Wheat	extracellular	37.25	46.34
EES08918	Sorghum	cytosol, plastid	47.06	45.71
CDY71728	Canola	cytosol	62.75	45.07
VIT_07s0104g01420.t01	Wine grape	cytosol	46.08	44.34
EES08919	Sorghum	cytosol	47.06	44.04
TraesCS3B01G506000.1	Wheat	mitochondrion	35.29	43.9
Os01t0936000-00	Rice	cytosol	52.94	43.2
HORVU5Hr1G025560.1	Barley	cytosol	55.88	41.91
VIT_01s0146g00220.t01	Wine grape	cytosol	59.8	39.1
CDX97821	Canola	mitochondrion	50.0	38.35
HORVU0Hr1G010190.2	Barley	cytosol	36.27	35.24
VIT_10s0003g03940.t01	Wine grape	mitochondrion	44.12	25.14
PGSC0003DMT400013650	Potato	cytosol	52.94	18.31

Protein Annotations

EntrezGene:100247747	wikigene:100247747	MapMan:18.8.2	MapMan:25.1.1.3	Gene3D:3.40.30.10	ProteinID:CCB56768
ProteinID:CCB56768.1	UniProt:F6HQ12	EMBL:FN596005	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	EntrezGene:LOC100247747	wikigene:LOC100247747	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF57	SUPFAM:SSF52833	TIGR:TC53782	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI00015CAC97	ArrayExpress:VIT_07s0104g01390	EnsemblPlantsGene:VIT_07s0104g01390	EnsemblPlants:VIT_07s0104g01390.t01	unigene:Vvi.7254	RefSeq:XP_002268050
RefSeq:XP_002268050.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:2407292..2407982

Molecular Weight (calculated)

11062.6 Da

IEP (calculated)

7.291

GRAVY (calculated)

0.133

Length

102 amino acids

Sequence
(BLAST)

001: MDKVTRLASE KGVVIFSKSS CCLCYAVNIL FQELGVTPTV HEIDQDPDGR EMEKALLRLG CNAPVPAVFI GGKLVGSTNE VMSRHLSGSL IPLLKPYQQT
101: LS

Best Arabidopsis Sequence Match ( AT2G47880.1 )
(BLAST)

001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY

Arabidopsis Description

GRXC13Glutaredoxin-C13 [Source:UniProtKB/Swiss-Prot;Acc:O82255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.