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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 2
  • cytosol 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G001860.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU6Hr1G069310.1
HORVU6Hr1G093960.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 HORVU6Hr1G069310.1 AT3G27960.1 21798944
AT4G15700.1 HORVU0Hr1G018470.1 AT1G22920.1 21798944
AT4G15700.1 HORVU0Hr1G025410.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G008160.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G056160.5 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G067660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G112000.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G021300.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G054660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G113750.1 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G047410.2 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G048730.1 AT1G22920.1 21798944
AT4G15700.1 HORVU6Hr1G023630.1 AT1G22920.1 21798944
AT4G15700.1 HORVU7Hr1G078010.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05230.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05250.1 21798944
AT4G15700.1 HORVU6Hr1G093960.1 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G048400.1 Wheat cytosol 95.15 95.15
TraesCS5B01G049200.1 Wheat cytosol 93.2 93.2
TraesCS5D01G054200.1 Wheat cytosol 91.26 91.26
HORVU5Hr1G010870.1 Barley cytosol 89.32 89.32
HORVU5Hr1G010960.1 Barley cytosol 88.35 88.35
Zm00001d040837_P001 Maize cytosol 83.5 83.5
EES00746 Sorghum cytosol 80.58 80.58
Os01t0368900-01 Rice cytosol 78.64 78.64
Zm00001d027695_P001 Maize cytosol 77.67 76.92
EES00745 Sorghum cytosol 75.73 75.73
Zm00001d040836_P001 Maize cytosol 74.76 74.76
HORVU5Hr1G025710.1 Barley cytosol, extracellular 64.08 64.08
HORVU5Hr1G025610.1 Barley cytosol 64.08 63.46
HORVU5Hr1G025680.1 Barley cytosol 63.11 63.11
Bra006467.1-P Field mustard cytosol 61.16 61.76
Bra023688.1-P Field mustard cytosol 61.16 61.76
CDX70828 Canola cytosol 61.16 61.76
CDX88929 Canola cytosol 61.16 61.76
HORVU3Hr1G099090.1 Barley cytosol 62.14 61.54
Bra002171.1-P Field mustard cytosol 60.19 60.78
CDX92597 Canola cytosol 60.19 60.78
CDY02610 Canola cytosol 60.19 60.78
CDY68328 Canola cytosol 60.19 60.78
CDY13904 Canola cytosol 59.22 59.8
KRH11237 Soybean cytosol 59.22 59.8
AT5G18600.1 Thale cress cytosol 58.25 58.82
KRH02215 Soybean cytosol 58.25 58.82
HORVU3Hr1G099050.2 Barley cytosol 61.16 58.33
KRH21036 Soybean cytosol 57.28 57.84
VIT_05s0020g01750.t01 Wine grape cytosol 57.28 57.28
HORVU5Hr1G033140.1 Barley cytosol 58.25 57.14
KRH50911 Soybean cytosol 56.31 56.86
PGSC0003DMT400042706 Potato cytosol 56.31 56.31
Os05t0149950-00 Rice cytosol, mitochondrion 62.14 56.14
KRH11238 Soybean cytosol 55.34 55.88
KRH21035 Soybean cytosol 55.34 55.88
VIT_05s0020g01760.t01 Wine grape cytosol 55.34 55.88
AT4G15700.1 Thale cress cytosol 54.37 54.9
KRH50912 Soybean cytosol 54.37 54.9
PGSC0003DMT400027946 Potato cytosol, plastid 54.37 54.9
PGSC0003DMT400041382 Potato cytosol 54.37 54.9
PGSC0003DMT400058374 Potato cytosol 54.37 54.9
Solyc01g067460.1.1 Tomato cytosol 54.37 54.9
Solyc04g011790.1.1 Tomato cytosol, plastid 54.37 54.9
PGSC0003DMT400027953 Potato cytosol, plastid 53.4 54.46
Bra012773.1-P Field mustard cytosol 53.4 53.92
Bra033503.1-P Field mustard cytosol 53.4 53.92
CDX90576 Canola cytosol 53.4 53.92
CDY09747 Canola cytosol 53.4 53.92
CDY66333 Canola cytosol 53.4 53.92
PGSC0003DMT400027950 Potato cytosol, plastid 53.4 53.92
PGSC0003DMT400041380 Potato cytosol, plastid 53.4 53.92
PGSC0003DMT400041381 Potato cytosol, plastid 53.4 53.92
Solyc01g067440.2.1 Tomato cytosol 53.4 53.92
Solyc04g011830.1.1 Tomato cytosol, plastid 53.4 53.92
Solyc04g011850.1.1 Tomato cytosol 53.4 53.92
HORVU3Hr1G099150.1 Barley cytosol, extracellular 33.98 53.85
PGSC0003DMT400041379 Potato cytosol, plastid 49.51 53.68
Bra038076.1-P Field mustard cytosol, extracellular 52.43 53.47
CDY09078 Canola cytosol, extracellular 52.43 53.47
CDY22745 Canola cytosol, extracellular 52.43 53.47
AT4G15660.1 Thale cress cytosol, extracellular 52.43 52.94
AT4G15680.1 Thale cress cytosol 52.43 52.94
AT4G15690.1 Thale cress cytosol 52.43 52.94
Bra033501.1-P Field mustard cytosol 52.43 52.94
PGSC0003DMT400027948 Potato cytosol, plastid 52.43 52.94
PGSC0003DMT400027949 Potato cytosol, plastid 52.43 52.94
PGSC0003DMT400027951 Potato cytosol, plastid 52.43 52.94
PGSC0003DMT400027954 Potato cytosol, plastid 52.43 52.94
PGSC0003DMT400058325 Potato cytosol 52.43 52.94
Solyc04g011810.1.1 Tomato cytosol, plastid 52.43 52.94
Solyc04g011840.1.1 Tomato cytosol 52.43 52.94
Solyc04g011870.1.1 Tomato cytosol, plastid 52.43 52.94
VIT_07s0104g01390.t01 Wine grape plasma membrane 52.43 52.94
HORVU5Hr1G025690.1 Barley cytosol 57.28 52.68
PGSC0003DMT400027952 Potato cytosol 48.54 52.63
Solyc04g011820.1.1 Tomato cytosol 48.54 52.63
KRH71536 Soybean extracellular 51.46 52.48
Bra033504.1-P Field mustard cytosol 48.54 52.08
AT4G15670.1 Thale cress cytosol 51.46 51.96
CDY22746 Canola cytosol 51.46 51.96
CDY54294 Canola cytosol 51.46 51.96
CDY54296 Canola cytosol 51.46 51.96
CDY66332 Canola cytosol 51.46 51.96
PGSC0003DMT400027947 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400029525 Potato cytosol 51.46 51.96
PGSC0003DMT400041378 Potato cytosol, plastid 51.46 51.96
Solyc04g011800.1.1 Tomato cytosol, plastid 51.46 51.96
Solyc04g011860.1.1 Tomato cytosol, plastid 51.46 51.96
Solyc09g074590.1.1 Tomato cytosol 51.46 51.96
KRH31919 Soybean cytosol, plasma membrane 50.49 51.49
Bra033499.1-P Field mustard cytosol 48.54 51.02
AT3G21460.1 Thale cress mitochondrion 50.49 50.98
Bra001831.1-P Field mustard cytosol 50.49 50.98
Bra032563.1-P Field mustard cytosol 50.49 50.98
Bra038075.1-P Field mustard cytosol 50.49 50.98
CDY32430 Canola cytosol, plastid 50.49 50.98
CDY32431 Canola cytosol 50.49 50.98
CDY32493 Canola cytosol 50.49 50.98
CDY48891 Canola cytosol 50.49 50.98
KRH68129 Soybean cytosol 50.49 50.98
PGSC0003DMT400029597 Potato cytosol 50.49 50.98
Solyc06g008750.1.1 Tomato cytosol 50.49 50.98
Solyc09g074600.1.1 Tomato cytosol 50.49 50.98
CDY69190 Canola cytosol 51.46 50.96
KRG96386 Soybean cytosol 49.51 50.49
KRH68125 Soybean cytosol 49.51 50.49
AT1G03020.1 Thale cress cytosol 49.51 50.0
Bra001830.1-P Field mustard cytosol, plastid 49.51 50.0
Bra033366.1-P Field mustard cytosol 49.51 50.0
CDX89921 Canola cytosol 49.51 50.0
CDY09079 Canola cytosol 49.51 50.0
CDY18141 Canola cytosol 49.51 50.0
CDY48890 Canola cytosol, plastid 49.51 50.0
KRG96387 Soybean cytosol 49.51 50.0
KRG96389 Soybean cytosol 49.51 50.0
KRH31917 Soybean cytosol 49.51 50.0
KRH68127 Soybean cytosol 49.51 50.0
PGSC0003DMT400013649 Potato cytosol 49.51 50.0
Solyc04g011780.1.1 Tomato extracellular 49.51 50.0
Solyc04g011880.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g053110.1.1 Tomato cytosol 49.51 50.0
Bra031540.1-P Field mustard cytosol 47.57 49.49
CDY06230 Canola cytosol 47.57 49.49
CDY09953 Canola cytosol 47.57 49.49
Bra014382.1-P Field mustard cytosol 48.54 49.02
Bra023883.1-P Field mustard cytosol, plastid 48.54 49.02
CDX89159 Canola cytosol 48.54 49.02
CDX93949 Canola cytosol 48.54 49.02
CDY19270 Canola cytosol, plastid 48.54 49.02
CDY37292 Canola cytosol, plastid 48.54 49.02
KRH71538 Soybean cytosol 48.54 49.02
PGSC0003DMT400029596 Potato cytosol 48.54 49.02
PGSC0003DMT400042707 Potato cytosol 48.54 49.02
AT2G47870.1 Thale cress cytosol 48.54 48.54
PGSC0003DMT400077393 Potato cytosol 48.54 48.54
Solyc06g054570.1.1 Tomato cytosol 48.54 48.54
Solyc06g008760.1.1 Tomato cytosol 47.57 48.51
AT1G06830.1 Thale cress cytosol 46.6 48.48
PGSC0003DMT400079099 Potato cytosol 45.63 48.45
PGSC0003DMT400077394 Potato cytosol 48.54 48.08
Solyc05g051720.1.1 Tomato cytosol 48.54 48.08
Bra007717.1-P Field mustard cytosol 35.92 48.05
AT2G30540.1 Thale cress cytosol 47.57 48.04
AT2G47880.1 Thale cress cytosol 47.57 48.04
AT3G62960.1 Thale cress cytosol 47.57 48.04
Bra007714.1-P Field mustard cytosol 47.57 48.04
CDX76675 Canola cytosol 47.57 48.04
CDY11462 Canola cytosol 47.57 48.04
KRH31918 Soybean cytosol 47.57 48.04
KRH71537 Soybean cytosol 47.57 48.04
Solyc09g074580.1.1 Tomato cytosol 47.57 48.04
VIT_07s0104g01400.t01 Wine grape cytosol 47.57 48.04
Bra004426.1-P Field mustard cytosol 47.57 47.57
CDX80138 Canola cytosol 47.57 47.57
Solyc05g051730.1.1 Tomato cytosol 47.57 47.57
CDY10229 Canola cytosol 45.63 47.47
CDY54881 Canola cytosol 45.63 47.47
AT3G62930.1 Thale cress cytosol 46.6 47.06
Bra003517.1-P Field mustard cytosol, extracellular 46.6 47.06
Bra004424.1-P Field mustard cytosol 46.6 47.06
Bra014379.1-P Field mustard cytosol 46.6 47.06
Bra018307.1-P Field mustard cytosol 46.6 47.06
Bra021641.1-P Field mustard cytosol 46.6 47.06
CDX76678 Canola cytosol 46.6 47.06
CDX80139 Canola cytosol 46.6 47.06
CDX89162 Canola cytosol 46.6 47.06
CDY10745 Canola cytosol 46.6 47.06
CDY23990 Canola cytosol 46.6 47.06
CDY29666 Canola cytosol 46.6 47.06
CDY52638 Canola cytosol 46.6 47.06
CDY53024 Canola cytosol 46.6 47.06
CDY68061 Canola cytosol 46.6 47.06
CDY27469 Canola cytosol 47.57 46.67
CDY53023 Canola cytosol 46.6 46.6
VIT_07s0104g01420.t01 Wine grape cytosol 47.57 46.23
Bra003515.1-P Field mustard cytosol 45.63 46.08
Bra007718.1-P Field mustard cytosol 45.63 46.08
CDX67910 Canola cytosol 45.63 46.08
CDX84825 Canola cytosol 45.63 46.08
CDX95739 Canola cytosol 45.63 46.08
CDX97824 Canola cytosol 45.63 46.08
CDY11466 Canola cytosol 45.63 46.08
CDY25124 Canola cytosol 45.63 46.08
AT3G62950.1 Thale cress cytosol 45.63 45.63
Bra014380.1-P Field mustard cytosol 45.63 45.63
CDX89161 Canola cytosol 45.63 45.63
CDY55528 Canola cytosol 45.63 44.76
CDX76677 Canola cytosol 44.66 44.66
CDY11464 Canola cytosol 44.66 44.66
CDY11465 Canola cytosol 44.66 44.66
HORVU5Hr1G025560.1 Barley cytosol 58.25 44.12
Bra021444.1-P Field mustard cytosol 44.66 43.81
HORVU0Hr1G010190.2 Barley cytosol 44.66 43.81
KRG96390 Soybean cytosol, plastid 44.66 43.81
Solyc09g074570.1.1 Tomato cytosol 44.66 43.4
KRH31916 Soybean cytosol 39.81 43.16
KRH68130 Soybean cytosol, plastid 43.69 42.86
HORVU0Hr1G003840.1 Barley extracellular 55.34 42.54
PGSC0003DMT400029673 Potato cytosol 43.69 42.45
KRH31915 Soybean cytosol, plastid 39.81 39.05
Bra015532.1-P Field mustard cytosol 39.81 28.28
CDY71728 Canola cytosol 38.84 28.17
CDX97821 Canola mitochondrion 33.01 25.56
HORVU2Hr1G060300.1 Barley cytosol 38.84 22.86
PGSC0003DMT400013650 Potato cytosol 35.92 12.54
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
EnsemblPlantsGene:HORVU5Hr1G010950EnsemblPlants:HORVU5Hr1G010950.1InterPro:IPR002109UniProt:M0XC92PFAM:PF00462PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF92SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0002962F76
Description
No Description!
Coordinates
chrchr5H:-:28331639..28332411
Molecular Weight (calculated)
10966.8 Da
IEP (calculated)
9.655
GRAVY (calculated)
0.323
Length
103 amino acids
Sequence
(BLAST)
001: MEQVTKLAGQ RAVVIFGTSS CCMCHTVTSL LRDIGANPTM VGLDEHPRGK EMEKALVRLL GRNPAVPAVF IGGRLVGCTD KVMSLHLGGK LVPLLRNAGA
101: VWV
Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)
001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV
Arabidopsis Description
GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.