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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:cytosol
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G001860.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU6Hr1G069310.1
HORVU6Hr1G093960.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 HORVU6Hr1G069310.1 AT3G27960.1 21798944
AT4G15700.1 HORVU0Hr1G018470.1 AT1G22920.1 21798944
AT4G15700.1 HORVU0Hr1G025410.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G008160.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G056160.5 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G067660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G112000.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G021300.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G054660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G113750.1 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G047410.2 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G048730.1 AT1G22920.1 21798944
AT4G15700.1 HORVU6Hr1G023630.1 AT1G22920.1 21798944
AT4G15700.1 HORVU7Hr1G078010.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05230.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05250.1 21798944
AT4G15700.1 HORVU6Hr1G093960.1 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G094700.1 Wheat cytosol 98.06 98.06
TraesCS5D01G107200.1 Wheat cytosol 98.06 98.06
TraesCS5B01G100900.1 Wheat cytosol 97.09 97.09
Os12t0538600-00 Rice cytosol, extracellular 88.35 88.35
HORVU5Hr1G025610.1 Barley cytosol 84.47 83.65
HORVU5Hr1G025710.1 Barley cytosol, extracellular 83.5 83.5
GSMUA_Achr11P... Banana cytosol, extracellular 71.84 71.84
GSMUA_Achr11P... Banana cytosol 69.9 69.9
GSMUA_Achr5P00380_001 Banana extracellular 68.93 68.93
GSMUA_Achr1P26720_001 Banana cytosol 67.96 67.96
GSMUA_Achr8P33660_001 Banana cytosol 66.02 66.02
HORVU5Hr1G010960.1 Barley cytosol 66.02 66.02
HORVU5Hr1G010870.1 Barley cytosol 65.05 65.05
GSMUA_Achr5P00370_001 Banana cytosol 64.08 64.08
KRH11237 Soybean cytosol 63.11 63.73
KRG96386 Soybean cytosol 62.14 63.37
GSMUA_Achr7P03690_001 Banana cytosol 63.11 63.11
HORVU5Hr1G010950.1 Barley cytosol 63.11 63.11
GSMUA_AchrUn_... Banana cytosol, extracellular 62.14 62.14
KRH21036 Soybean cytosol 61.16 61.76
KRH68125 Soybean cytosol 60.19 61.39
HORVU5Hr1G033140.1 Barley cytosol 61.16 60.0
AT4G15700.1 Thale cress cytosol 59.22 59.8
Bra033503.1-P Field mustard cytosol 59.22 59.8
CDY66333 Canola cytosol 59.22 59.8
PGSC0003DMT400058374 Potato cytosol 59.22 59.8
Solyc01g067460.1.1 Tomato cytosol 59.22 59.8
HORVU3Hr1G099090.1 Barley cytosol 60.19 59.62
VIT_05s0020g01750.t01 Wine grape cytosol 59.22 59.22
AT4G15680.1 Thale cress cytosol 58.25 58.82
Bra023688.1-P Field mustard cytosol 58.25 58.82
CDY02610 Canola cytosol 58.25 58.82
KRH02215 Soybean cytosol 58.25 58.82
KRH50911 Soybean cytosol 58.25 58.82
AT4G15660.1 Thale cress cytosol, extracellular 57.28 57.84
AT4G15690.1 Thale cress cytosol 57.28 57.84
Bra006467.1-P Field mustard cytosol 57.28 57.84
Bra033501.1-P Field mustard cytosol 57.28 57.84
CDX70828 Canola cytosol 57.28 57.84
CDX88929 Canola cytosol 57.28 57.84
CDY68328 Canola cytosol 57.28 57.84
VIT_05s0020g01760.t01 Wine grape cytosol 57.28 57.84
KRH71536 Soybean extracellular 56.31 57.43
AT4G15670.1 Thale cress cytosol 56.31 56.86
AT5G18600.1 Thale cress cytosol 56.31 56.86
Bra002171.1-P Field mustard cytosol 56.31 56.86
Bra004424.1-P Field mustard cytosol 56.31 56.86
CDX80139 Canola cytosol 56.31 56.86
CDX92597 Canola cytosol 56.31 56.86
CDY13904 Canola cytosol 56.31 56.86
CDY53024 Canola cytosol 56.31 56.86
PGSC0003DMT400029597 Potato cytosol 56.31 56.86
VIT_07s0104g01390.t01 Wine grape plasma membrane 56.31 56.86
AT1G06830.1 Thale cress cytosol 54.37 56.57
HORVU3Hr1G099050.2 Barley cytosol 59.22 56.48
KRH31919 Soybean cytosol, plasma membrane 55.34 56.44
Bra033504.1-P Field mustard cytosol 52.43 56.25
HORVU5Hr1G025690.1 Barley cytosol 61.16 56.25
AT2G47880.1 Thale cress cytosol 55.34 55.88
Bra007718.1-P Field mustard cytosol 55.34 55.88
Bra012773.1-P Field mustard cytosol 55.34 55.88
CDX76678 Canola cytosol 55.34 55.88
CDX90576 Canola cytosol 55.34 55.88
CDY09747 Canola cytosol 55.34 55.88
CDY11466 Canola cytosol 55.34 55.88
CDY22746 Canola cytosol 55.34 55.88
CDY54294 Canola cytosol 55.34 55.88
KRH11238 Soybean cytosol 55.34 55.88
KRH50912 Soybean cytosol 55.34 55.88
PGSC0003DMT400029525 Potato cytosol 55.34 55.88
PGSC0003DMT400058325 Potato cytosol 55.34 55.88
Solyc01g067440.2.1 Tomato cytosol 55.34 55.88
CDY10229 Canola cytosol 53.4 55.56
CDY27469 Canola cytosol 56.31 55.24
Bra038075.1-P Field mustard cytosol 54.37 54.9
CDY66332 Canola cytosol 54.37 54.9
KRH21035 Soybean cytosol 54.37 54.9
Solyc09g074590.1.1 Tomato cytosol 54.37 54.9
Solyc09g074600.1.1 Tomato cytosol 54.37 54.9
Bra031540.1-P Field mustard cytosol 52.43 54.55
CDY06230 Canola cytosol 52.43 54.55
CDY09953 Canola cytosol 52.43 54.55
Bra038076.1-P Field mustard cytosol, extracellular 53.4 54.46
CDY09078 Canola cytosol, extracellular 53.4 54.46
CDY22745 Canola cytosol, extracellular 53.4 54.46
CDY55528 Canola cytosol 55.34 54.29
Bra033499.1-P Field mustard cytosol 51.46 54.08
AT2G30540.1 Thale cress cytosol 53.4 53.92
AT3G62960.1 Thale cress cytosol 53.4 53.92
Bra003517.1-P Field mustard cytosol, extracellular 53.4 53.92
Bra014379.1-P Field mustard cytosol 53.4 53.92
CDX89162 Canola cytosol 53.4 53.92
CDX95739 Canola cytosol 53.4 53.92
CDY09079 Canola cytosol 53.4 53.92
CDY54296 Canola cytosol 53.4 53.92
CDY68061 Canola cytosol 53.4 53.92
PGSC0003DMT400013649 Potato cytosol 53.4 53.92
HORVU3Hr1G099150.1 Barley cytosol, extracellular 33.98 53.85
CDY54881 Canola cytosol 51.46 53.54
Solyc06g008760.1.1 Tomato cytosol 52.43 53.47
Bra021444.1-P Field mustard cytosol 54.37 53.33
Bra021641.1-P Field mustard cytosol 52.43 52.94
CDY23990 Canola cytosol 52.43 52.94
CDY29666 Canola cytosol 52.43 52.94
CDY52638 Canola cytosol 52.43 52.94
Solyc06g008750.1.1 Tomato cytosol 52.43 52.94
CDY69190 Canola cytosol 53.4 52.88
Solyc06g054570.1.1 Tomato cytosol 52.43 52.43
Bra018307.1-P Field mustard cytosol 51.46 51.96
CDX84825 Canola cytosol 51.46 51.96
CDX97824 Canola cytosol 51.46 51.96
CDY10745 Canola cytosol 51.46 51.96
KRG96387 Soybean cytosol 51.46 51.96
KRH31918 Soybean cytosol 51.46 51.96
KRH68127 Soybean cytosol 51.46 51.96
KRH71537 Soybean cytosol 51.46 51.96
PGSC0003DMT400041381 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400041379 Potato cytosol, plastid 47.57 51.58
PGSC0003DMT400079099 Potato cytosol 48.54 51.55
PGSC0003DMT400042706 Potato cytosol 51.46 51.46
AT3G21460.1 Thale cress mitochondrion 50.49 50.98
PGSC0003DMT400027952 Potato cytosol 46.6 50.53
Bra001831.1-P Field mustard cytosol 49.51 50.0
CDY32431 Canola cytosol 49.51 50.0
CDY48891 Canola cytosol 49.51 50.0
KRH68129 Soybean cytosol 49.51 50.0
PGSC0003DMT400029596 Potato cytosol 49.51 50.0
PGSC0003DMT400041380 Potato cytosol, plastid 49.51 50.0
Solyc04g011790.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g011800.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g011860.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g011870.1.1 Tomato cytosol, plastid 49.51 50.0
Bra004426.1-P Field mustard cytosol 49.51 49.51
CDX80138 Canola cytosol 49.51 49.51
Solyc04g011820.1.1 Tomato cytosol 45.63 49.47
Bra023883.1-P Field mustard cytosol, plastid 48.54 49.02
CDY19270 Canola cytosol, plastid 48.54 49.02
CDY32430 Canola cytosol, plastid 48.54 49.02
CDY37292 Canola cytosol, plastid 48.54 49.02
KRG96389 Soybean cytosol 48.54 49.02
PGSC0003DMT400027946 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400027947 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400027948 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400027950 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400027951 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400041382 Potato cytosol 48.54 49.02
Solyc04g011810.1.1 Tomato cytosol, plastid 48.54 49.02
Solyc04g011830.1.1 Tomato cytosol, plastid 48.54 49.02
Solyc04g011850.1.1 Tomato cytosol 48.54 49.02
Solyc09g074580.1.1 Tomato cytosol 48.54 49.02
VIT_07s0104g01400.t01 Wine grape cytosol 48.54 49.02
AT2G47870.1 Thale cress cytosol 48.54 48.54
CDY53023 Canola cytosol 48.54 48.54
Solyc09g074570.1.1 Tomato cytosol 49.51 48.11
VIT_07s0104g01420.t01 Wine grape cytosol 49.51 48.11
Bra007717.1-P Field mustard cytosol 35.92 48.05
Bra001830.1-P Field mustard cytosol, plastid 47.57 48.04
CDY48890 Canola cytosol, plastid 47.57 48.04
KRH31917 Soybean cytosol 47.57 48.04
PGSC0003DMT400027949 Potato cytosol, plastid 47.57 48.04
AT3G62950.1 Thale cress cytosol 47.57 47.57
Bra014380.1-P Field mustard cytosol 47.57 47.57
CDX89161 Canola cytosol 47.57 47.57
PGSC0003DMT400027953 Potato cytosol, plastid 46.6 47.52
PGSC0003DMT400029673 Potato cytosol 48.54 47.17
PGSC0003DMT400077394 Potato cytosol 47.57 47.12
Solyc05g051720.1.1 Tomato cytosol 47.57 47.12
Bra032563.1-P Field mustard cytosol 46.6 47.06
CDY32493 Canola cytosol 46.6 47.06
KRH71538 Soybean cytosol 46.6 47.06
PGSC0003DMT400027954 Potato cytosol, plastid 46.6 47.06
PGSC0003DMT400041378 Potato cytosol, plastid 46.6 47.06
Solyc04g011780.1.1 Tomato extracellular 46.6 47.06
Solyc04g011840.1.1 Tomato cytosol 46.6 47.06
Solyc04g011880.1.1 Tomato cytosol, plastid 46.6 47.06
CDX76677 Canola cytosol 46.6 46.6
CDY11464 Canola cytosol 46.6 46.6
CDY11465 Canola cytosol 46.6 46.6
PGSC0003DMT400077393 Potato cytosol 46.6 46.6
Solyc05g051730.1.1 Tomato cytosol 46.6 46.6
HORVU5Hr1G025560.1 Barley cytosol 61.16 46.32
AT1G03020.1 Thale cress cytosol 45.63 46.08
CDY18141 Canola cytosol 45.63 46.08
Bra033366.1-P Field mustard cytosol 44.66 45.1
CDX89921 Canola cytosol 44.66 45.1
HORVU0Hr1G003840.1 Barley extracellular 57.28 44.03
Bra014382.1-P Field mustard cytosol 42.72 43.14
CDX89159 Canola cytosol 42.72 43.14
CDX93949 Canola cytosol 42.72 43.14
AT3G62930.1 Thale cress cytosol 41.75 42.16
Solyc04g053110.1.1 Tomato cytosol 41.75 42.16
KRH31916 Soybean cytosol 38.84 42.11
Bra003515.1-P Field mustard cytosol 40.78 41.18
Bra007714.1-P Field mustard cytosol 40.78 41.18
CDX67910 Canola cytosol 40.78 41.18
CDX76675 Canola cytosol 40.78 41.18
CDY11462 Canola cytosol 40.78 41.18
PGSC0003DMT400042707 Potato cytosol 40.78 41.18
CDY25124 Canola cytosol 39.81 40.2
HORVU0Hr1G010190.2 Barley cytosol 40.78 40.0
KRH68130 Soybean cytosol, plastid 38.84 38.1
KRG96390 Soybean cytosol, plastid 37.86 37.14
Bra015532.1-P Field mustard cytosol 50.49 35.86
KRH31915 Soybean cytosol, plastid 35.92 35.24
CDY71728 Canola cytosol 45.63 33.1
CDX97821 Canola mitochondrion 36.89 28.57
HORVU2Hr1G060300.1 Barley cytosol 41.75 24.57
PGSC0003DMT400013650 Potato cytosol 44.66 15.59
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10UniProt:A0A287QQ78GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2
InterPro:GlutaredoxinEnsemblPlantsGene:HORVU5Hr1G025680EnsemblPlants:HORVU5Hr1G025680.1InterPro:IPR002109PFAM:PF00462PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF98SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI000B471135
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:-:141390254..141391085
Molecular Weight (calculated)
11178.2 Da
IEP (calculated)
8.955
GRAVY (calculated)
0.277
Length
103 amino acids
Sequence
(BLAST)
001: MDRVMKMAPE RGVVIFTLNS CCMCHTVTRL FTDLGVNALV HELDHDPKGK EMERALLKLL GKGPPVPAVF IGGKLVGGTN KIMSLHLGGE LVPMIRNAGA
101: LWL
Best Arabidopsis Sequence Match ( AT4G15680.1 )
(BLAST)
001: MDKLQKMISE KSVVIFSKNS CCMSHTIKTL FIDFGVNPTI YELDEINRGK EIEQALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRVGAL
101: WL
Arabidopsis Description
GRXS4Monothiol glutaredoxin-S4 [Source:UniProtKB/Swiss-Prot;Acc:O23419]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.