Factsheet for PGSC0003DMT400027952

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g011820.1.1	Tomato	cytosol	91.58	91.58
PGSC0003DMT400041382	Potato	cytosol	87.37	81.37
PGSC0003DMT400027946	Potato	cytosol, plastid	86.32	80.39
PGSC0003DMT400027949	Potato	cytosol, plastid	86.32	80.39
PGSC0003DMT400027950	Potato	cytosol, plastid	86.32	80.39
PGSC0003DMT400041379	Potato	cytosol, plastid	80.0	80.0
PGSC0003DMT400027947	Potato	cytosol, plastid	84.21	78.43
PGSC0003DMT400027948	Potato	cytosol, plastid	84.21	78.43
PGSC0003DMT400027951	Potato	cytosol, plastid	84.21	78.43
PGSC0003DMT400027954	Potato	cytosol, plastid	83.16	77.45
PGSC0003DMT400041380	Potato	cytosol, plastid	83.16	77.45
PGSC0003DMT400041381	Potato	cytosol, plastid	82.11	76.47
PGSC0003DMT400027953	Potato	cytosol, plastid	81.05	76.24
PGSC0003DMT400042706	Potato	cytosol	75.79	69.9
PGSC0003DMT400077393	Potato	cytosol	70.53	65.05
PGSC0003DMT400041378	Potato	cytosol, plastid	68.42	63.73
PGSC0003DMT400077394	Potato	cytosol	69.47	63.46
VIT_07s0104g01420.t01	Wine grape	cytosol	70.53	63.21
PGSC0003DMT400029597	Potato	cytosol	61.05	56.86
PGSC0003DMT400029525	Potato	cytosol	60.0	55.88
PGSC0003DMT400042707	Potato	cytosol	60.0	55.88
GSMUA_Achr5P00380_001	Banana	extracellular	53.68	49.51
TraesCS5D01G054900.1	Wheat	cytosol	53.68	49.51
PGSC0003DMT400013649	Potato	cytosol	52.63	49.02
TraesCS5B01G049000.1	Wheat	cytosol	44.21	48.84
GSMUA_Achr11P...	Banana	cytosol, extracellular	52.63	48.54
HORVU5Hr1G010950.1	Barley	cytosol	52.63	48.54
TraesCS5B01G048400.1	Wheat	cytosol	52.63	48.54
TraesCS5B01G049200.1	Wheat	cytosol	52.63	48.54
PGSC0003DMT400058374	Potato	cytosol	51.58	48.04
GSMUA_Achr8P09970_001	Banana	cytosol	51.58	47.57
HORVU5Hr1G010870.1	Barley	cytosol	51.58	47.57
TraesCS5A01G044800.1	Wheat	cytosol	51.58	47.57
TraesCS5A01G044900.1	Wheat	cytosol	51.58	47.57
TraesCS5A01G045000.1	Wheat	cytosol	51.58	47.57
TraesCS5B01G049100.1	Wheat	cytosol	51.58	47.57
TraesCS5D01G054200.1	Wheat	cytosol	51.58	47.57
TraesCS5D01G055000.1	Wheat	cytosol	51.58	47.57
TraesCS5D01G055100.1	Wheat	cytosol	51.58	47.57
Zm00001d040837_P001	Maize	cytosol	51.58	47.57
HORVU5Hr1G025610.1	Barley	cytosol	51.58	47.12
EES00746	Sorghum	cytosol	50.53	46.6
GSMUA_AchrUn_...	Banana	cytosol, extracellular	50.53	46.6
HORVU5Hr1G010960.1	Barley	cytosol	50.53	46.6
HORVU5Hr1G025680.1	Barley	cytosol	50.53	46.6
Os01t0368900-01	Rice	cytosol	50.53	46.6
Os12t0538600-00	Rice	cytosol, extracellular	50.53	46.6
TraesCS5A01G044100.1	Wheat	cytosol	50.53	46.6
TraesCS5A01G044700.1	Wheat	cytosol	50.53	46.6
TraesCS5B01G048300.1	Wheat	cytosol	50.53	46.6
TraesCS5B01G048600.1	Wheat	cytosol	50.53	46.6
TraesCS5B01G048900.1	Wheat	cytosol	50.53	46.6
TraesCS5B01G100900.1	Wheat	cytosol	50.53	46.6
TraesCS5D01G054000.1	Wheat	cytosol	50.53	46.6
TraesCS5D01G054800.1	Wheat	cytosol	50.53	46.6
PGSC0003DMT400079099	Potato	cytosol	47.37	46.39
TraesCS5A01G094600.1	Wheat	cytosol	50.53	46.15
TraesCS5B01G100700.1	Wheat	cytosol	50.53	46.15
Zm00001d027695_P001	Maize	cytosol	50.53	46.15
PGSC0003DMT400058325	Potato	cytosol	49.47	46.08
GSMUA_Achr11P...	Banana	cytosol	49.47	45.63
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	49.47	45.63
TraesCS5A01G094700.1	Wheat	cytosol	49.47	45.63
TraesCS5A01G094900.1	Wheat	extracellular	49.47	45.63
TraesCS5A01G095500.1	Wheat	cytosol	49.47	45.63
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	49.47	45.63
TraesCS5D01G054400.1	Wheat	cytosol	49.47	45.63
TraesCS5D01G107200.1	Wheat	cytosol	49.47	45.63
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	49.47	45.63
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	49.47	45.63
TraesCS5D01G106900.1	Wheat	cytosol	49.47	45.19
PGSC0003DMT400029596	Potato	cytosol	48.42	45.1
TraesCS5A01G044400.1	Wheat	cytosol	48.42	44.66
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	48.42	44.66
Zm00001d023870_P001	Maize	cytosol, extracellular	48.42	44.23
GSMUA_Achr11P...	Banana	cytosol, extracellular	47.37	43.69
GSMUA_Achr1P26720_001	Banana	cytosol	47.37	43.69
Zm00001d023873_P001	Maize	cytosol	47.37	43.27
EES00745	Sorghum	cytosol	46.32	42.72
GSMUA_Achr8P33660_001	Banana	cytosol	46.32	42.72
TraesCS5B01G101000.1	Wheat	cytosol	46.32	42.72
EES02025	Sorghum	cytosol	47.37	42.06
EES16097	Sorghum	cytosol	47.37	42.06
OQU79243	Sorghum	cytosol	47.37	42.06
EES16092	Sorghum	cytosol	46.32	41.9
TraesCS5A01G094800.1	Wheat	cytosol	45.26	41.75
TraesCS5D01G107300.1	Wheat	cytosol	45.26	41.75
Zm00001d040836_P001	Maize	cytosol	45.26	41.75
Zm00001d042187_P001	Maize	cytosol	48.42	41.44
TraesCS3B01G504700.1	Wheat	cytosol	45.26	41.35
GSMUA_Achr5P00370_001	Banana	cytosol	44.21	40.78
GSMUA_Achr7P03690_001	Banana	cytosol	44.21	40.78
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	44.21	40.38
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	44.21	40.38
TraesCS3A01G462200.1	Wheat	cytosol	43.16	39.42
TraesCS3B01G506400.1	Wheat	cytosol	43.16	39.42
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	43.16	39.42
TraesCS4D01G147300.1	Wheat	cytosol	43.16	39.42
TraesCS5A01G094500.1	Wheat	cytosol	43.16	39.42
TraesCS5B01G100600.1	Wheat	cytosol	43.16	39.42
TraesCS5D01G106800.1	Wheat	cytosol	43.16	39.42
Zm00001d023869_P001	Maize	cytosol	43.16	39.42
HORVU5Hr1G025690.1	Barley	cytosol	46.32	39.29
EES16093	Sorghum	cytosol	43.16	39.05
HORVU5Hr1G033140.1	Barley	cytosol	43.16	39.05
Os12t0538700-01	Rice	cytosol	42.11	38.46
TraesCS3A01G463000.1	Wheat	cytosol	42.11	38.46
TraesCS3A01G463200.1	Wheat	cytosol	42.11	38.46
TraesCS3B01G505300.1	Wheat	cytosol	42.11	38.46
TraesCS3B01G506500.1	Wheat	cytosol	42.11	38.46
TraesCS3D01G456900.1	Wheat	cytosol	42.11	38.46
EES16096	Sorghum	cytosol	42.11	38.1
HORVU3Hr1G099050.2	Barley	cytosol	43.16	37.96
Os11t0656000-00	Rice	cytosol, plastid	43.16	37.61
HORVU3Hr1G099090.1	Barley	cytosol	41.05	37.5
TraesCS3B01G506200.1	Wheat	cytosol	41.05	37.5
TraesCS3D01G457200.1	Wheat	cytosol	41.05	37.5
EES17138	Sorghum	cytosol	41.05	36.79
PGSC0003DMT400029673	Potato	cytosol	41.05	36.79
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	40.0	36.54
Zm00001d023872_P001	Maize	cytosol, mitochondrion	40.0	36.19
Os11t0655900-01	Rice	extracellular	41.05	36.11
Os05t0149950-00	Rice	cytosol, mitochondrion	43.16	35.96
Os11t0656400-00	Rice	cytosol, plastid	41.05	35.78
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	24.21	35.38
Zm00001d048720_P001	Maize	cytosol	41.05	35.14
Os11t0656700-00	Rice	cytosol, plastid	40.0	34.86
EES08919	Sorghum	cytosol	38.95	33.95
PGSC0003DMT400013430	Potato	cytosol	46.32	33.85
Zm00001d048719_P001	Maize	cytosol	38.95	33.64
PGSC0003DMT400013427	Potato	mitochondrion, plastid	42.11	33.33
Os01t0936000-00	Rice	cytosol	43.16	32.8
PGSC0003DMT400013435	Potato	cytosol, plastid	41.05	32.5
EES08918	Sorghum	cytosol, plastid	35.79	32.38
TraesCS3A01G462800.1	Wheat	extracellular	27.37	31.71
TraesCS3B01G506000.1	Wheat	mitochondrion	26.32	30.49
HORVU5Hr1G025560.1	Barley	cytosol	43.16	30.15
PGSC0003DMT400006076	Potato	plastid	42.11	29.85
PGSC0003DMT400046079	Potato	cytosol	38.95	28.68
HORVU0Hr1G010190.2	Barley	cytosol	31.58	28.57
PGSC0003DMT400013650	Potato	cytosol	33.68	10.85

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M1AQF2	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400010768	PGSC:PGSC0003DMG400010768
EnsemblPlants:PGSC0003DMT400027952	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF186	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0002966429	:	:	:

Description

Glutaredoxin [Source:PGSC_GENE;Acc:PGSC0003DMG400010768]

Coordinates

chr4:-:7693180..7693818

Molecular Weight (calculated)

10364.9 Da

IEP (calculated)

9.400

GRAVY (calculated)

-0.027

Length

95 amino acids

Sequence
(BLAST)

1: MDMAMELRTT NSVVIFTKNS CCISHSIKTL IRSFGANPTI YELDTHPNGK QMEKALKNLG CQPSVPAVFI GKELVGGANE IMSLNLRGKL KQLLG

Best Arabidopsis Sequence Match ( AT1G03020.1 )
(BLAST)

001: MEKISNLLED KPVVIFSKTS CCMSHSIKSL ISGYGANSTV YELDEMSNGP EIERALVELG CKPTVPAVFI GQELVGGANQ LMSLQVRNQL ASLLRRAGAI
101: WI

Arabidopsis Description

GRXS1Monothiol glutaredoxin-S1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.