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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • mitochondrion 1
  • cytosol 2
  • plastid 3
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0923800-01
Os02t0510000-01
Os02t0708400-01
Os02t0828566-01
Os03t0401200-01
Os03t0422702-00
Os04t0388800-01
Os04t0654700-02
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Os02t0708400-01 AT3G27960.1 21798944
AT4G15700.1 Os04t0654700-02 AT1G22920.1 21798944
AT4G15700.1 Os06t0207966-00 AT1G73360.1 21798944
AT4G15700.1 Os06t0208100-00 AT1G73360.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05230.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05230.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05230.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05230.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05250.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05250.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0828566-01 AT5G08330.1 21798944
AT4G15700.1 Os03t0422702-00 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0656700-00 Rice cytosol, plastid 96.33 96.33
Os11t0656000-00 Rice cytosol, plastid 94.5 94.5
Os11t0655900-01 Rice extracellular 72.48 73.15
TraesCS4D01G147300.1 Wheat cytosol 69.72 73.08
Zm00001d048719_P001 Maize cytosol 70.64 70.0
EES08919 Sorghum cytosol 69.72 69.72
EES08918 Sorghum cytosol, plastid 66.06 68.57
Os12t0538600-00 Rice cytosol, extracellular 63.3 66.99
Zm00001d048720_P001 Maize cytosol 67.89 66.67
Os12t0538700-01 Rice cytosol 60.55 63.46
GSMUA_Achr8P09970_001 Banana cytosol 59.63 63.11
Os01t0368900-01 Rice cytosol 59.63 63.11
GSMUA_Achr11P... Banana cytosol, extracellular 56.88 60.19
VIT_05s0020g01750.t01 Wine grape cytosol 56.88 60.19
Bra002171.1-P Field mustard cytosol 53.21 56.86
CDX92597 Canola cytosol 53.21 56.86
CDY13904 Canola cytosol 53.21 56.86
CDY32430 Canola cytosol, plastid 53.21 56.86
VIT_05s0020g01760.t01 Wine grape cytosol 53.21 56.86
KRH71536 Soybean extracellular 52.29 56.44
Os05t0149950-00 Rice cytosol, mitochondrion 58.72 56.14
AT3G21460.1 Thale cress mitochondrion 52.29 55.88
Bra001830.1-P Field mustard cytosol, plastid 52.29 55.88
Bra023688.1-P Field mustard cytosol 52.29 55.88
Bra023883.1-P Field mustard cytosol, plastid 52.29 55.88
CDY19270 Canola cytosol, plastid 52.29 55.88
CDY37292 Canola cytosol, plastid 52.29 55.88
CDY48890 Canola cytosol, plastid 52.29 55.88
CDY68328 Canola cytosol 52.29 55.88
Solyc01g067440.2.1 Tomato cytosol 52.29 55.88
Bra001831.1-P Field mustard cytosol 51.38 54.9
Bra006467.1-P Field mustard cytosol 51.38 54.9
CDX70828 Canola cytosol 51.38 54.9
CDX88929 Canola cytosol 51.38 54.9
CDY02610 Canola cytosol 51.38 54.9
CDY32431 Canola cytosol 51.38 54.9
CDY48891 Canola cytosol 51.38 54.9
KRH02215 Soybean cytosol 51.38 54.9
KRH50912 Soybean cytosol 51.38 54.9
PGSC0003DMT400058325 Potato cytosol 51.38 54.9
KRG96386 Soybean cytosol 50.46 54.46
KRH31919 Soybean cytosol, plasma membrane 50.46 54.46
KRH68125 Soybean cytosol 50.46 54.46
KRH11237 Soybean cytosol 50.46 53.92
VIT_07s0104g01390.t01 Wine grape plasma membrane 50.46 53.92
AT2G47870.1 Thale cress cytosol 50.46 53.4
KRH11238 Soybean cytosol 49.54 52.94
KRH21035 Soybean cytosol 49.54 52.94
KRH50911 Soybean cytosol 49.54 52.94
Solyc01g067460.1.1 Tomato cytosol 49.54 52.94
Os01t0936000-00 Rice cytosol 60.55 52.8
Bra033504.1-P Field mustard cytosol 45.87 52.08
AT4G15700.1 Thale cress cytosol 48.62 51.96
AT5G18600.1 Thale cress cytosol 48.62 51.96
KRH21036 Soybean cytosol 48.62 51.96
PGSC0003DMT400058374 Potato cytosol 48.62 51.96
Solyc06g008760.1.1 Tomato cytosol 47.71 51.49
PGSC0003DMT400079099 Potato cytosol 44.95 50.52
CDY53023 Canola cytosol 47.71 50.49
AT4G15690.1 Thale cress cytosol 46.79 50.0
Bra033503.1-P Field mustard cytosol 46.79 50.0
CDY66332 Canola cytosol 46.79 50.0
CDY66333 Canola cytosol 46.79 50.0
Bra004426.1-P Field mustard cytosol 46.79 49.51
CDX80138 Canola cytosol 46.79 49.51
Bra031540.1-P Field mustard cytosol 44.95 49.49
CDY06230 Canola cytosol 44.95 49.49
CDY09953 Canola cytosol 44.95 49.49
Bra007717.1-P Field mustard cytosol 34.86 49.35
AT4G15660.1 Thale cress cytosol, extracellular 45.87 49.02
AT4G15670.1 Thale cress cytosol 45.87 49.02
AT4G15680.1 Thale cress cytosol 45.87 49.02
Bra033501.1-P Field mustard cytosol 45.87 49.02
CDY09079 Canola cytosol 45.87 49.02
CDY54296 Canola cytosol 45.87 49.02
KRG96387 Soybean cytosol 45.87 49.02
KRH31918 Soybean cytosol 45.87 49.02
KRH68127 Soybean cytosol 45.87 49.02
KRH71537 Soybean cytosol 45.87 49.02
AT3G62950.1 Thale cress cytosol 45.87 48.54
Bra014380.1-P Field mustard cytosol 45.87 48.54
CDX89161 Canola cytosol 45.87 48.54
Bra004424.1-P Field mustard cytosol 44.95 48.04
Bra012773.1-P Field mustard cytosol 44.95 48.04
CDX80139 Canola cytosol 44.95 48.04
CDX90576 Canola cytosol 44.95 48.04
CDX95739 Canola cytosol 44.95 48.04
CDY09747 Canola cytosol 44.95 48.04
CDY22746 Canola cytosol 44.95 48.04
CDY53024 Canola cytosol 44.95 48.04
CDY54294 Canola cytosol 44.95 48.04
PGSC0003DMT400029525 Potato cytosol 44.95 48.04
PGSC0003DMT400029596 Potato cytosol 44.95 48.04
Solyc09g074590.1.1 Tomato cytosol 44.95 48.04
VIT_07s0104g01400.t01 Wine grape cytosol 44.95 48.04
Bra033499.1-P Field mustard cytosol 43.12 47.96
CDX76677 Canola cytosol 44.95 47.57
CDY11464 Canola cytosol 44.95 47.57
CDY11465 Canola cytosol 44.95 47.57
Solyc06g054570.1.1 Tomato cytosol 44.95 47.57
AT1G06830.1 Thale cress cytosol 43.12 47.47
CDY10229 Canola cytosol 43.12 47.47
CDY54881 Canola cytosol 43.12 47.47
Bra038075.1-P Field mustard cytosol 44.04 47.06
PGSC0003DMT400029597 Potato cytosol 44.04 47.06
Solyc06g008750.1.1 Tomato cytosol 44.04 47.06
Solyc09g074580.1.1 Tomato cytosol 44.04 47.06
Solyc09g074600.1.1 Tomato cytosol 44.04 47.06
Os04t0393500-01 Rice cytosol 57.8 46.67
Bra038076.1-P Field mustard cytosol, extracellular 43.12 46.53
CDY09078 Canola cytosol, extracellular 43.12 46.53
CDY22745 Canola cytosol, extracellular 43.12 46.53
CDY69190 Canola cytosol 44.04 46.15
AT2G30540.1 Thale cress cytosol 43.12 46.08
AT2G47880.1 Thale cress cytosol 43.12 46.08
Bra021641.1-P Field mustard cytosol 43.12 46.08
CDY23990 Canola cytosol 43.12 46.08
CDY29666 Canola cytosol 43.12 46.08
CDY52638 Canola cytosol 43.12 46.08
PGSC0003DMT400013649 Potato cytosol 43.12 46.08
PGSC0003DMT400041381 Potato cytosol, plastid 43.12 46.08
Os02t0512400-01 Rice cytosol 56.88 45.93
CDY55528 Canola cytosol 44.04 45.71
AT3G62960.1 Thale cress cytosol 42.2 45.1
Bra007718.1-P Field mustard cytosol 42.2 45.1
Bra018307.1-P Field mustard cytosol 42.2 45.1
CDX76678 Canola cytosol 42.2 45.1
CDX84825 Canola cytosol 42.2 45.1
CDX97824 Canola cytosol 42.2 45.1
CDY10745 Canola cytosol 42.2 45.1
CDY11466 Canola cytosol 42.2 45.1
Bra021444.1-P Field mustard cytosol 43.12 44.76
CDY27469 Canola cytosol 43.12 44.76
PGSC0003DMT400042706 Potato cytosol 42.2 44.66
PGSC0003DMT400029673 Potato cytosol 43.12 44.34
Bra003515.1-P Field mustard cytosol 41.28 44.12
Bra014379.1-P Field mustard cytosol 41.28 44.12
CDX67910 Canola cytosol 41.28 44.12
CDX89162 Canola cytosol 41.28 44.12
CDY68061 Canola cytosol 41.28 44.12
PGSC0003DMT400041380 Potato cytosol, plastid 41.28 44.12
Solyc04g011790.1.1 Tomato cytosol, plastid 41.28 44.12
Solyc09g074570.1.1 Tomato cytosol 42.2 43.4
Bra003517.1-P Field mustard cytosol, extracellular 40.37 43.14
Bra014382.1-P Field mustard cytosol 40.37 43.14
CDX76675 Canola cytosol 40.37 43.14
CDX89159 Canola cytosol 40.37 43.14
CDX93949 Canola cytosol 40.37 43.14
CDY25124 Canola cytosol 40.37 43.14
Solyc04g011870.1.1 Tomato cytosol, plastid 40.37 43.14
AT3G62930.1 Thale cress cytosol 39.45 42.16
Bra007714.1-P Field mustard cytosol 39.45 42.16
CDY11462 Canola cytosol 39.45 42.16
PGSC0003DMT400027946 Potato cytosol, plastid 39.45 42.16
PGSC0003DMT400041378 Potato cytosol, plastid 39.45 42.16
PGSC0003DMT400041382 Potato cytosol 39.45 42.16
Solyc04g011830.1.1 Tomato cytosol, plastid 39.45 42.16
Solyc04g011850.1.1 Tomato cytosol 39.45 42.16
PGSC0003DMT400041379 Potato cytosol, plastid 36.7 42.11
Solyc04g011820.1.1 Tomato cytosol 36.7 42.11
KRH68129 Soybean cytosol 38.53 41.18
PGSC0003DMT400027948 Potato cytosol, plastid 38.53 41.18
PGSC0003DMT400027949 Potato cytosol, plastid 38.53 41.18
PGSC0003DMT400027950 Potato cytosol, plastid 38.53 41.18
PGSC0003DMT400027951 Potato cytosol, plastid 38.53 41.18
PGSC0003DMT400027954 Potato cytosol, plastid 38.53 41.18
Solyc04g011810.1.1 Tomato cytosol, plastid 38.53 41.18
Solyc04g011840.1.1 Tomato cytosol 38.53 41.18
Solyc04g011860.1.1 Tomato cytosol, plastid 38.53 41.18
PGSC0003DMT400027952 Potato cytosol 35.78 41.05
PGSC0003DMT400027953 Potato cytosol, plastid 37.61 40.59
VIT_07s0104g01420.t01 Wine grape cytosol 39.45 40.57
KRG96389 Soybean cytosol 37.61 40.2
KRH31917 Soybean cytosol 37.61 40.2
KRH71538 Soybean cytosol 37.61 40.2
PGSC0003DMT400027947 Potato cytosol, plastid 37.61 40.2
PGSC0003DMT400042707 Potato cytosol 37.61 40.2
Solyc04g011800.1.1 Tomato cytosol, plastid 37.61 40.2
Solyc04g053110.1.1 Tomato cytosol 37.61 40.2
Solyc05g051730.1.1 Tomato cytosol 37.61 39.81
PGSC0003DMT400077394 Potato cytosol 37.61 39.42
Solyc05g051720.1.1 Tomato cytosol 37.61 39.42
AT1G03020.1 Thale cress cytosol 36.7 39.22
Bra033366.1-P Field mustard cytosol 36.7 39.22
CDX89921 Canola cytosol 36.7 39.22
Solyc04g011880.1.1 Tomato cytosol, plastid 36.7 39.22
KRH31916 Soybean cytosol 33.95 38.95
PGSC0003DMT400077393 Potato cytosol 36.7 38.84
CDY18141 Canola cytosol 35.78 38.24
Solyc04g011780.1.1 Tomato extracellular 35.78 38.24
Bra032563.1-P Field mustard cytosol 34.86 37.25
CDY32493 Canola cytosol 34.86 37.25
KRH68130 Soybean cytosol, plastid 34.86 36.19
KRG96390 Soybean cytosol, plastid 33.95 35.24
KRH31915 Soybean cytosol, plastid 32.11 33.33
Os07t0151100-01 Rice cytosol 51.38 29.17
Bra015532.1-P Field mustard cytosol 38.53 28.97
CDY71728 Canola cytosol 35.78 27.46
CDX97821 Canola mitochondrion 31.19 25.56
PGSC0003DMT400013650 Potato cytosol 37.61 13.9
Protein Annotations
EntrezGene:107276177MapMan:18.8.2Gene3D:3.40.30.10ProteinID:ABA95162.1EMBL:AP008217ProteinID:BAT15106.1
ProteinID:EAZ19161.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114
InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109EnsemblPlantsGene:Os11g0656400EnsemblPlants:Os11t0656400-00
PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF72UniProt:Q2R073
SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0000681D28RefSeq:XP_015616737.1:
Description
GLUTAREDOXIN 25Similar to Glutaredoxin-C13. (Os11t0656400-00)
Coordinates
chr11:+:26285141..26285470
Molecular Weight (calculated)
11358.2 Da
IEP (calculated)
8.511
GRAVY (calculated)
0.402
Length
109 amino acids
Sequence
(BLAST)
001: MAEMVARLAS ERAVVVFTKS GCCMCTAVTT LLGELAVSAA VHELDREPLG KEMERELARR LYGSGGRGGP AVPAVFIGGS LVGGTSKVMT VHLKGELVPM
101: LKSAGALWL
Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)
001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV
Arabidopsis Description
GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.